Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq890 154 2e-32
seq1482 125 8e-24
seq743 125 8e-24
>seq890
Length=125401
Score = 154 bits (170), Expect = 2e-32
Identities = 183/248 (74%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
|||| ||||| || || | ||| ||||| || | ||| || || || || |||||||
Sbjct 47138 TCCAGATGGTTCAGATACAGGTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCTCC 47197
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
|| || || ||||||||||| ||| ||||| | |||| ||| |||||||| ||
Sbjct 47198 AGACCCACGACCTGGGCCACCATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGC 47257
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105
|| |||||| ||||| | | ||| ||||||||||| ||| | ||||| ||
Sbjct 47258 ACGCCCAGGAAGATGTCGGCGCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTGCG 47317
Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165
||| | |||||| ||||| ||||||||||||||| |||||| || || |||||| |||
Sbjct 47318 ACGAAGAACTGGAACAGGCAGTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCCGGG 47377
Query 147166 TTCCAGGC 147173
||||||||
Sbjct 47378 TTCCAGGC 47385
>seq1482
Length=483770
Score = 125 bits (138), Expect = 8e-24
Identities = 174/244 (71%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 146947 TGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACC 147006
|||||||| ||||| ||||| | || || |||| || | |||||| || || || |||
Sbjct 421997 TGCGCGTCACCCAGCGTGTGAATGAATTCGCCCGCTTTCAAGCCGGTGACCTGTGCGACC 421938
Query 147007 ATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCC 147066
|| || ||||||| ||| || |||||||| || || || ||| | || |
Sbjct 421937 ATCATCGTCAGCAGCGCATAGGATGCGATGTTGAACGGCACGCCGAGGAAGACATCAGCG 421878
Query 147067 GACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATG 147126
|| | ||| || ||||||||||| || | |||| ||| || || ||||| |||||
Sbjct 421877 GAGCGCTGATAGAGCTGGCACGACAGTTTGCCGTTGGCGACATAGAACTGAAACAGGCAA 421818
Query 147127 TGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGC 147186
|||||||| ||||||||||| | || ||||| ||||| |||||||| | ||||
Sbjct 421817 TGGCACGGGGGCAGCGCCATCTTATCGACCTCGGCGGGATTCCACGCCGAGACGATCAGC 421758
Query 147187 CGCC 147190
||||
Sbjct 421757 CGCC 421754
>seq743
Length=263205
Score = 125 bits (138), Expect = 8e-24
Identities = 188/267 (70%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983
|||||| |||||| || | |||||||| || || ||||| | || || ||||||
Sbjct 72898 GCTCCAGATGGTTGGAATACAGATGCGCGTCGCCGAGCGTGTGGATGAAATCGCCCGGCG 72957
Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043
||| | ||||| || || | ||| || ||||||| ||| || |||||||| |
Sbjct 72958 CAAGATCCGTCACCTGTGCGATCATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACG 73017
Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103
| || || || || ||| |||| | ||| || |||||||||||||| | |||| |
Sbjct 73018 GCACGCCGAGAAACACGTCGGCCGAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCG 73077
Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163
| ||||| |||||| ||||| ||||| ||||||||||||||| | || || |
Sbjct 73078 CGACGTAGAACTGGAACAGGCAATGGCATGGCGGCAGCGCCATGTGATCGACATCGGCCG 73137
Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCC 147190
| ||||| || ||| | ||||||||
Sbjct 73138 GATTCCATGCGCTGACGATCAGCCGCC 73164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583477066893600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |