Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq792 107 1e-18 seq1158 91.5 1e-13 seq1191 89.7 4e-13 >seq792 Length=204027 Score = 107 bits (118), Expect = 1e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 97944 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 98003 || || || || ||||| || ||||| || ||||| | || || ||||||| | Sbjct 144658 GGATCAGTAACAACCGGGGTCAGCAGGTGTGGAATACCATCATAGATGGACAGTTCCAGC 144599 Query 98004 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 98063 |||||||| || | |||||| || | || || ||| |||||||||| || Sbjct 144598 ATCTTCGGATCAACCATGATCAGGCGGCATTCTTCCGGCTTGAAACGGTAGAGCAGCGAC 144539 Query 98064 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 98123 | | ||||| ||||||| | ||||| ||||| ||||||| ||| |||||||| ||| Sbjct 144538 AGGATCATCGTGTTGATGGCGACCGACTTACCCGAACCGGTGGTGCCTGCCACCAGAAGG 144479 Query 98124 TGGGGCATTTTGGCCAGGTTCAGGGA 98149 || ||||||||||||| |||||| || Sbjct 144478 TGAGGCATTTTGGCCA-GTTCAGCGA 144454 >seq1158 Length=42521 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 97932 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGG 97991 || |||| | ||| |||||||| || ||| || ||||| || || |||| || Sbjct 20815 ACGGCCTTCTTGGGATCGGTGACAACGGGCGCCAGCAGGTGCGGAATGCCGTCATAGACC 20756 Query 97992 GTGAGTTCCACCATCTTCGGGTCGATCATGATGA-GCTTGACCCGATCAGGAT-TGGCTC 98049 | || |||| |||||| |||||||||||||||| || || || | || | |||| Sbjct 20755 GACAGCTCCAGCATCTTGGGGTCGATCATGATGAAGCGGCACTCGGCCGGGCTGTGGC-- 20698 Query 98050 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGC 98109 | || || || || | | ||| | ||||| | ||||||||||| ||||||| || Sbjct 20697 GATACAGGATCGACAGGATCATGGCGTTGACCCCGACCGACTTGCCCGAGCCGGTGGTGC 20638 Query 98110 CAGCCACCAGCAGGTGGGGCATTTTGGCCAGGT 98142 | || | ||||||||||||||| ||||||| Sbjct 20637 CCGCGATCAGCAGGTGGGGCATGCGCGCCAGGT 20605 >seq1191 Length=688723 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 97932 ACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGG 97990 ||||||| | ||||| || || || || || || || || ||||| |||| || Sbjct 597364 ACCGCCTTCTTCGGG-TCTGTCACGACGGGTGTCAGCAGATGCGGGATGCCGTCATAGAC 597422 Query 97991 GGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCC-GATCAGGATTGGCTC 98049 || |||||| | |||||||||||||| ||||||||| ||| | | || || | | Sbjct 597423 GGAGAGTTCGAGCATCTTCGGGTCGACCATGATGAGGC-GACACTGGTCGGGCCTCAGCC 597481 Query 98050 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGC 98109 ||||||||| || | | ||| | ||| ||| | ||||||||||| ||||||| || Sbjct 597482 GGTAGAGCAGCGACAGGATCATGGTGTTAATGCCGACCGACTTGCCCGAGCCGGTGGTGC 597541 Query 98110 CAGCCACCAGCAGGTGGGGCAT 98131 | || | |||||| || ||||| Sbjct 597542 CGGCGATCAGCAGATGCGGCAT 597563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351455979111448