Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_026591.1 Length=44716 Score E Sequences producing significant alignments: (Bits) Value seq998 91.5 4e-14 seq316 86.0 2e-12 >seq998 Length=1052685 Score = 91.5 bits (100), Expect = 4e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1665 CCGCCCATAGGCATGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAG 1724 ||||| |||| ||||||||| ||||||||||| ||||||||||| ||| ||| |||| Sbjct 267569 CCGCCTGTAGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAG 267628 Query 1725 GTTCGAGTCCTGCCG 1739 ||||||||||||||| Sbjct 267629 GTTCGAGTCCTGCCG 267643 >seq316 Length=8699 Score = 86.0 bits (94), Expect = 2e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1672 TAGGCATGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAG 1731 |||| ||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| Sbjct 921 TAGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAG 980 Query 1732 TCCTGCC 1738 |||||| Sbjct 981 CCCTGCC 987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142967055051764