Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq845 132 2e-26 seq812 114 5e-21 seq743 104 8e-18 seq713 93.3 2e-14 >seq845 Length=164897 Score = 132 bits (146), Expect = 2e-26 Identities = 290/430 (67%), Gaps = 6/430 (1%) Strand=Plus/Minus Query 36693 GTTCGAGCTGACCGTCTCCCTCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCA 36752 || |||||||||| || | |||| |||||||||||||| ||||| || ||||| Sbjct 111587 GTGCGAGCTGACCTTCGGCGTCGGGCCTGCGGGCACCGGCAAGACGTTTCTGGCGGCGGC 111528 Query 36753 CCACGGACTGCGCCTGCTGGAGGCCAAGGAAA--TCCAGCGACTCGTCATCACTCGCCCC 36810 | | || ||||||| | | ||| | | | || || |||||||| ||||| Sbjct 111527 CTATGGCGCATCCCTGCTGCGGCGC--GGACAGGTGGACCGGCTGGTCATCACCCGCCCG 111470 Query 36811 GCCGTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCT 36870 || || ||||| | |||||||| |||| ||||||||||| | | | |||||| | | Sbjct 111469 GCGGTTGAGGCGGGCGAGAAGCTGGGCTTCCTGCCCGGCGACCTGAACGAGAAGGTCGAC 111410 Query 36871 CCGTACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTGGC-CCGACGATGGCCAA 36929 || || ||| |||||| ||| ||| ||| ||| | | ||| |||| || | | | Sbjct 111409 CCCTATCTGGCCCCGATCTGGGAGGCGCTGAACGATATTCTGGGCGCCGAGGACGTGC-A 111351 Query 36930 GCGCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAAC 36989 ||||| | || | || || |||| |||||| | |||| |||||| ||||| || Sbjct 111350 GCGCCGACGCGACAAGGGCGAGATCGAAGCCGCCCCCATCGCCTTCATGCGCGGCCGCAC 111291 Query 36990 CTTCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCCACCCCGCGACAGGCCGC 37049 | | | | || | ||| |||||| |||||| |||||| || | | | ||| Sbjct 111290 CCTGAGCCACGCCTTCGTCATCGTGGACGAGGCCCAGAACACCTCGCGTCTGCAGATGAA 111231 Query 37050 GCTGCTGGTGACCCGCCTGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCA 37109 | || || ||||||| |||||| || ||||| || ||| || |||||| | || Sbjct 111230 GATGGTGCTGACCCGTCTGGGCGAGGGCGCGCGGATGGTGGTGACGGGCGACCCGTCGCA 111171 Query 37110 GTGCGACCTC 37119 | ||||||| Sbjct 111170 GATCGACCTC 111161 >seq812 Length=1388629 Score = 114 bits (126), Expect = 5e-21 Identities = 231/341 (68%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 36696 CGAGCTGACCGTCTCCCTCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCA 36755 |||| |||| || | ||||||| || |||||||| ||||||| || || | || Sbjct 369806 CGAGTTGACGTTCGGCATCGGCCCCGCCGGCACCGGCAAGACCTGGCTTGCGGTGGCGCA 369865 Query 36756 CGGACTGCGC--CTGCTGGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCC 36813 | | |||| ||| | ||| ||||||| || | || || | | || || ||||| Sbjct 369866 GG--CGGCGCAACTGTTCGAGCGCAAGGAAGTCGATCGCATCATTCTGACGCGGCCCGCG 369923 Query 36814 GTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCG 36873 || || |||| || |||||||| ||||||||||| | | || ||| | | ||| Sbjct 369924 GTGGAAGCCGGCGAACGGCTCGGCTTCCTGCCCGGCGACCTGCGCGAAAAGGTCGATCCT 369983 Query 36874 TACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTGGCCCGACGATGGCCAAGCGC 36933 || || |||||| || ||| || ||| ||| | | || || | | ||||| Sbjct 369984 TATCTTCGCCCGATCTACGATGCGCTGTACGATCTGATGGATTCGCGCATCGTCGAGCGC 370043 Query 36934 CTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTC 36993 | | ||||| || || |||||||||| |||||||| | |||||| ||||| ||| | Sbjct 370044 GCGTTGCAGACCGGCGAGATCGAGATCGCGCCGCTGGCTTTCATGCGCGGCCGCACCCTG 370103 Query 36994 AACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCCAC 37034 | | || | | ||||| ||||||| ||||||| |||| Sbjct 370104 ACCAACGCCGCCATCATCCTCGACGAGGCGCAGAACACCAC 370144 >seq743 Length=263205 Score = 104 bits (114), Expect = 8e-18 Identities = 306/466 (66%), Gaps = 17/466 (4%) Strand=Plus/Plus Query 4529 CTGATCGTG---GACGAGTCGTCCATGGTCGACGAGTCGGTC--GGTGAAGACCTCCTGT 4583 ||||||||| ||||| | || |||||||| | || || || ||||| ||| Sbjct 181876 CTGATCGTGATCGACGAATGTTCGATGGTCGATGC--CGATCTTGGGCGCGACCTGATGT 181933 Query 4584 CGTTCGGTGTGCCAATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCGGTGGCCGGGG 4643 |||||| || | || | || ||||| ||||| ||| |||| ||| | || |||| Sbjct 181934 CGTTCGACTGCCCTCTGCTGGTGCTCGGCGATCCCGCACAGTTGCCACCGATCGCGGGGG 181993 Query 4644 CTGGATTCTTCACC-AAGCAGAAGGCCGACTTCCTGCTGACCGACATCCACCGCCAGGCC 4702 || ||||||||| |||| ||| ||||| |||||||||| | || |||||||| Sbjct 181994 GCGGCTTCTTCACCGAAGCGGAAC-CCGACGCTATGCTGACCGAGGTACATCGCCAGGCG 182052 Query 4703 CGCGACAACCCCATCATTGAGATGTC----GCGCATCGTCCGCGAGGGTGGAACCCTGAA 4758 | || | || ||| | ||||| ||| || |||||||| | | || | Sbjct 182053 CAGAACGATCCGATCGTGCGCATGTCAATGGCG----GTGCGCGAGGGCCGTGCATTGGA 182108 Query 4759 CCTGGGCCGCTACGGAGACAGCGAAGTCGTCCGGGGCGCTGACTTCCAGCGCGACTGGGT 4818 |||| | ||| ||||||||||| || | || | | || | | ||| | || Sbjct 182109 GAACGGCCAGTTCGGTGACAGCGAAGTGGTGAGCCGCAACGGCCTCGATCCAGACCGCGT 182168 Query 4819 ATTCCAGGCTGACCAGATTCTCGTCGGGAAAAACGACACCCGCCGAGCCTACAACGCTCG 4878 | ||| ||||||||||| |||||| ||| |||| ||||| ||||||||| || Sbjct 182169 GATGGCGGCAGACCAGATTCTGGTCGGGCGCAACAACACGCGCCGCGCCTACAACATGCG 182228 Query 4879 CATCCGCGAGCTGCGCGGGGCCGACCGAGCTTACCCTCTCAAGGGCGACAAGCTGGTCTG 4938 | || || ||| ||| || | || | |||||||||||||||||| Sbjct 182229 GGTGCGACAGAAAAACGGAATCGAAGATGCATTGCCGGTGGCGGGCGACAAGCTGGTCTG 182288 Query 4939 CCTTCGCAACAACCACGACTCGGGCCTGCTGAACGGCTCCCTCTGG 4984 ||| |||||||||| | | || ||| | |||||| ||| ||| Sbjct 182289 CCTGCGCAACAACCGCAAGAAGGCGCTGTTCAACGGCGGCCTGTGG 182334 Score = 86.0 bits (94), Expect = 2e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 4175 TTCCGCCTGTTCGGGTATGCCGGCACGGGCAAGACCACCCTGGCCCGCCACATCGCTGAG 4234 |||||||||||||| |||||||| || |||||||||||||| ||||| || ||||| || Sbjct 181639 TTCCGCCTGTTCGGCTATGCCGGGACCGGCAAGACCACCCTCGCCCGTCATATCGCCGAT 181698 Query 4235 AACGTGGACGGGCTTGTGCTGTTCGCCGCCCCGACCGGCAAGGCCGC 4281 ||| | || ||| |||||| || |||||||||||||| Sbjct 181699 GCCGTCAATGGCGAGGTGAAGTTCGCTGCTTTCACCGGCAAGGCCGC 181745 >seq713 Length=1192841 Score = 93.3 bits (102), Expect = 2e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 4175 TTCCGCCTGTTCGGGTATGCCGGCACGGGCAAGACCACCCTGGCCCGCCACATCGCTGAG 4234 |||||||||||||| || |||||||| ||||||||||| ||||| || || ||||| || Sbjct 113726 TTCCGCCTGTTCGGCTACGCCGGCACCGGCAAGACCACACTGGCGCGACATATCGCGGAC 113667 Query 4235 AACGTGGACGGGCTTGTGCTGTTCGCCGCCCCGACCGGCAAGGCCGCCTACGTCCTGAAG 4294 ||| ||||| ||| ||||||||| ||||| ||||| || || || Sbjct 113666 GGCGTCGACGGCGAAGTGAAATTCGCCGCCTTCACCGGAAAGGCGGCGCTGGTGATGCGC 113607 Query 4295 ACCAAGGGCTGCCCGAACACCAGCACGATCCACCAGCTGATCTA 4338 | |||||||||| ||| || ||||| ||| |||||||| Sbjct 113606 AACAAGGGCTGCGACAACGCCTCGACGATTCACTCCCTGATCTA 113563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180793581703962