Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_026605.1
Length=46869
Score E
Sequences producing significant alignments: (Bits) Value
seq743 122 3e-23
>seq743
Length=263205
Score = 122 bits (134), Expect = 3e-23
Identities = 305/457 (67%), Gaps = 30/457 (7%)
Strand=Plus/Minus
Query 36165 TGCGCGTGTTGAAACCGGGCGGTCACATGTTGGCGTTCGGCGGTTCGCGCACGTGGCACC 36224
|||||||| ||||||| ||||| ||| | |||||||||| |||||| | ||||
Sbjct 30928 TGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGGCTATCACC 30869
Query 36225 GGCTGGCGGCGGCGATCGAGGACGCCGGGTTCGAGGTCCGCGACTCGATCGCGTGGCTGT 36284
| ||||| |||||||| || || ||||| || ||||||||||| || |||| | |
Sbjct 30868 GCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGATTT 30809
Query 36285 ACGGCAGCGGGTTCCCCAAGTCGCTCGACGTATCCAAGGCGATCGACAAGGCCGCAGGCG 36344
| || | ||||| || ||||||| || || ||||| ||| || || || || || |
Sbjct 30808 ATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGCGGCGGGTG 30749
Query 36345 CCGAGCGCGAGCAGGTACCAGCGACGGGCGGACTCCACAACAACGCGAACCTTAACGACG 36404
| || || ||| | | | |||| | || ||| |||| |||| |||| ||
Sbjct 30748 CGGAACGTGAGGTGCTGC--GCGAACG-----CTACACCACAAAGCGA--TTTAAGCCCG 30698
Query 36405 ATGGC-------TGGTCCAAGAT-CG--------GCAGCAGTACACCAATGATG-GATGG 36447
|| | || | ||| | || ||| | | || || | |||
Sbjct 30697 GTGCCACCGTCGAGGCCGAAGGTGCGTGGGGTAAGCAAGATGTCGCCTATACCGCCGTGG 30638
Query 36448 CCCCAGC-CCCGCTACCCCCGAGGCCGCGCAGTGGCAGGGCTGGGGCACGGCGCTCAAAC 36506
| || || || || ||||| ||||| || ||| | || ||||| || ||||||||||
Sbjct 30637 ATACTGCACCTGCAACGCCCGAAGCCGCCCAATGGGAAGGATGGGGAACCGCGCTCAAAC 30578
Query 36507 CGGCGTTTGAGCCAATCGTCGTCGCGCGGAAACC-CTTGCAG--GGCACCGTCGCCGCGA 36563
| || || || || || ||| ||||||| || || || ||| ||||| || ||||| |
Sbjct 30577 CCGCCTTCGAACCCATTGTCCTCGCGCGCAAGCCGCTGTCAGAAGGCACGGTTGCCGCCA 30518
Query 36564 ACGTGCTCGACCACGGCACCGGCGCGCTGAACATCGA 36600
||||||| | ||||| ||||||||||| || ||
Sbjct 30517 ACGTGCTGCGCTGGGGCACGGGCGCGCTGAATATTGA 30481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149856532412578
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |