Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq827 86.0 8e-12 seq1318 84.2 3e-11 >seq827 Length=173386 Score = 86.0 bits (94), Expect = 8e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18747 ACCCGTATGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTG 18806 ||| ||| | || |||||||||||||||||||| ||| ||||||||||| ||| |||| | Sbjct 17734 ACCTGTACGCGGGTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCG 17675 Query 18807 GGTTCAAGTCCCATCAATCCCG 18828 ||||| || ||| ||| || || Sbjct 17674 GGTTCGAGCCCCGTCACTCGCG 17653 >seq1318 Length=12988 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 154264 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGAGTCCAAC 154323 ||||||||||||||||||||||| ||||||||||| || |||||| ||||||| ||| || Sbjct 1821 GTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTCGAATCCTAC 1762 Query 154324 C 154324 | Sbjct 1761 C 1761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605998244895120