Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_027204.1
Length=194701
Score E
Sequences producing significant alignments: (Bits) Value
seq1482 107 2e-18
seq713 93.3 5e-14
seq890 84.2 3e-11
>seq1482
Length=483770
Score = 107 bits (118), Expect = 2e-18
Identities = 181/262 (69%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 176401 CCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGA 176460
|||| || | |||||| ||| | || | ||||| || || || | ||| ||
Sbjct 422023 CCTGTTCCAGATGATTGGAATAAAGATGCGCGTCACCCAGCGTGTGAATGAATTCGCCCG 421964
Query 176461 CTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGA 176520
||| ||||||| || | |||| || ||||| || || || || ||||||||||
Sbjct 421963 CTTTCAAGCCGGTGACCTGTGCGACCATCATCGTCAGCAGCGCATAGGATGCGATGTTGA 421904
Query 176521 ATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGT 176580
| || | || | |||||| || |||| ||||||| |||| |||||||| ||||
Sbjct 421903 ACGGCACGCCGAGGAAGACATCAGCGGAGCGCTGATAGAGCTGGCACGACAGTTTGCCGT 421844
Query 176581 TGCGGACATAGAACTGGAAACCGTAGTGACACGGCGGCAAAGCCATTAGATCGACCGCCC 176640
|| |||||||||||| || | | || ||||| |||| ||||| ||||||| |
Sbjct 421843 TGGCGACATAGAACTGAAACAGGCAATGGCACGGGGGCAGCGCCATCTTATCGACCTCGG 421784
Query 176641 CGACATTCCAAGCCGAGACCAT 176662
|| |||||| |||||||| ||
Sbjct 421783 CGGGATTCCACGCCGAGACGAT 421762
>seq713
Length=1192841
Score = 93.3 bits (102), Expect = 5e-14
Identities = 142/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 148951 AAAGCTTCTTGTGCTGGACGAATGTTCGATGGTCAATGCGGAAATGCTTCTTGACTTGTT 149010
|||||| | || | |||||||| ||||||||| |||| ||| | | ||| || |
Sbjct 113493 AAAGCTGATCGTCATCGACGAATGCTCGATGGTCGATGCCGAACTCGGCCGCGACCTGAT 113434
Query 149011 TACATTCGAAATTCCGATGCTGGTGTTAGGCGATCCCGGACAGCTTCCGCCAATCGAAGG 149070
| |||||| |||| | ||||| | |||||||||| ||||||||||| || ||||
Sbjct 113433 GTCGTTCGAATGTCCGCTATTGGTGCTCGGCGATCCCGCGCAGCTTCCGCCGATTCAAGG 113374
Query 149071 CAGGAGTCCGCTTACCGATGTTCG-CCCGGATGCTATGTTGACGGAAATCCATCGACAGG 149129
| | || | |||||| | || ||||| || ||| |||| ||| | ||||| ||||
Sbjct 113373 CGGCGGTTTTTTCACCGAT-TCCGAGCCGGACGCGATGCTGACCGAAGTGCATCGTCAGG 113315
Query 149130 CAGAAGGCAATCCGATCATC 149149
| || | |||||||| ||
Sbjct 113314 CCGAGCACGATCCGATCGTC 113295
>seq890
Length=125401
Score = 84.2 bits (92), Expect = 3e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 176493 GTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGC 176552
||||| || ||||| |||||||||||||| || | |||| ||||| ||| || |||
Sbjct 47225 GTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCGCTACGC 47284
Query 176553 TGATTCCAAAGGCAGGACAGTTTCCCGT-TGCGGACATAGAACTGGAAACCGTAGTGACA 176611
|||| | ||||| ||||| |||| ||| ||| |||||||||| | |||| ||
Sbjct 47285 TGATACAGCTGGCAGCTGAGTTTTCCGTCTGC-GACGAAGAACTGGAACAGGCAGTGGCA 47343
Query 176612 CGGCGGCAAAGCCAT 176626
|||||||| |||||
Sbjct 47344 CGGCGGCAGGGCCAT 47358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622903528126440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |