Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_027292.1 Length=39167 Score E Sequences producing significant alignments: (Bits) Value seq724 82.4 2e-11 >seq724 Length=279373 Score = 82.4 bits (90), Expect = 2e-11 Identities = 179/263 (68%), Gaps = 14/263 (5%) Strand=Plus/Minus Query 5032 AAGTTCGCTGACTACGAGGCGATCTACTTCCCGCATAACCTCGACTGGCGTGGTCGAGTG 5091 |||||||| ||| | || || ||||||||||| || | |||||||| || || || || Sbjct 202674 AAGTTCGCCGACGAAGAAGCCATCTACTTCCCCCACAGCCTCGACTTCCGAGGCCGGGTC 202615 Query 5092 TACTCACTGACCTCCTTCAG------CCCACAGGGCAACGATGTCACCAAGGGCCTCTTG 5145 || | ||| | || | | ||| |||||| | |||||| |||||| ||| || Sbjct 202614 TATCCGCTGGCGACCGGCGGACCTCACCCGCAGGGCGATGATGTCGCCAAGG--CTC-TG 202558 Query 5146 CAGGCTT---CCAAAGGTGAACCCATCGGCGAAGATGGTATCCAATGGCTGATGATCCAC 5202 | | | | || | ||| | || ||| |||||| || || |||||| ||||||| Sbjct 202557 CTGACCTTCGCCGATGGTCATCCGATCACCGAAGACGGCGCCCGCTGGCTGGCGATCCAC 202498 Query 5203 GGTGCGAATACCGCT-GGTGTCGATAAGGTTCCTTTCGATGAACGTAAACAATGGGTTCG 5261 |||| | | | || |||| ||||| | ||||| || ||| || ||||| || Sbjct 202497 CTTGCG-GGCCTGTTCGGCATCGACAAGGTATCGTTCGACGAGCGTGTCCAGTGGGTGCG 202439 Query 5262 GGACAATGAAGAGTGCATCCTCG 5284 ||||||| | || |||||||| Sbjct 202438 GGACAATCAGGACGCCATCCTCG 202416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125210571133902