Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_027292.1
Length=39167
Score E
Sequences producing significant alignments: (Bits) Value
seq724 82.4 2e-11
>seq724
Length=279373
Score = 82.4 bits (90), Expect = 2e-11
Identities = 179/263 (68%), Gaps = 14/263 (5%)
Strand=Plus/Minus
Query 5032 AAGTTCGCTGACTACGAGGCGATCTACTTCCCGCATAACCTCGACTGGCGTGGTCGAGTG 5091
|||||||| ||| | || || ||||||||||| || | |||||||| || || || ||
Sbjct 202674 AAGTTCGCCGACGAAGAAGCCATCTACTTCCCCCACAGCCTCGACTTCCGAGGCCGGGTC 202615
Query 5092 TACTCACTGACCTCCTTCAG------CCCACAGGGCAACGATGTCACCAAGGGCCTCTTG 5145
|| | ||| | || | | ||| |||||| | |||||| |||||| ||| ||
Sbjct 202614 TATCCGCTGGCGACCGGCGGACCTCACCCGCAGGGCGATGATGTCGCCAAGG--CTC-TG 202558
Query 5146 CAGGCTT---CCAAAGGTGAACCCATCGGCGAAGATGGTATCCAATGGCTGATGATCCAC 5202
| | | | || | ||| | || ||| |||||| || || |||||| |||||||
Sbjct 202557 CTGACCTTCGCCGATGGTCATCCGATCACCGAAGACGGCGCCCGCTGGCTGGCGATCCAC 202498
Query 5203 GGTGCGAATACCGCT-GGTGTCGATAAGGTTCCTTTCGATGAACGTAAACAATGGGTTCG 5261
|||| | | | || |||| ||||| | ||||| || ||| || ||||| ||
Sbjct 202497 CTTGCG-GGCCTGTTCGGCATCGACAAGGTATCGTTCGACGAGCGTGTCCAGTGGGTGCG 202439
Query 5262 GGACAATGAAGAGTGCATCCTCG 5284
||||||| | || ||||||||
Sbjct 202438 GGACAATCAGGACGCCATCCTCG 202416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125210571133902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |