Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq513 84.2 2e-11 >seq513 Length=6546 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 69047 GGAGTTGTTCCAATCATGAAACTCTATGAAGATTCATTTTCATATGCCAATCAGTTGGGG 69106 || ||| | ||| | |||||| | ||||||||||||||||||||| ||||| | || Sbjct 1371 GGCGTTATCCCAGTTATGAAAATTCTTGAAGATTCATTTTCATATGCTAATCAACTAGGT 1312 Query 69107 ACAAGAAATGGGGCAGGAGTAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTC 69166 |||| | || || || | | |||| | ||||| ||| ||||||| | ||| Sbjct 1311 CAAAGACAAGGTGCTGGGGCAGTTTATTTAAATGTTCATCATCCAGATATTATGTTATTT 1252 Query 69167 CTCTCTACaaaaaaaGAAAATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGT 69226 | | |||| |||||||| || |||||| ||||| ||||| | | ||| | || Sbjct 1251 TTAGATTCAAAGCGTGAAAATGCAGATGAAAAAATTCGTATTAAATCAATGTCTTTAGGA 1192 Query 69227 GTTGTAGTTCCTGATA 69242 || || ||||||||| Sbjct 1191 GTAGTTATTCCTGATA 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415893201882291