Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_027381.1
Length=68365
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 152 2e-32
seq1007 152 2e-32
>seq1008
Length=53843
Score = 152 bits (168), Expect = 2e-32
Identities = 678/1063 (64%), Gaps = 17/1063 (2%)
Strand=Plus/Minus
Query 62191 AGAAGCAAAGTTAAACCAGATATTACGTCTCATCATCTCATCCTGAAGTAGAGGGATGAA 62250
|||||| ||||| |||||||| ||||| | ||||| ||||| || ||||||
Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGATGAA 4811
Query 62251 T-CCACCTTGTTGACCTGTAACTTCAATACCTACAGATTGAGGTTGGTATTCAACT--AC 62307
||| || | || || || ||||| | || || || || || | ||| || || ||
Sbjct 4810 GGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGAT--TATACATCTGAAC 4754
Query 62308 CAATCTAAATAAATCATCGAAGTTTTTATCCATAAGCTGACGTCTACAGATACCATCAAC 62367
||| | || | ||||||| || ||||| |||| |||| |||||||||
Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694
Query 62368 CCAGAACCAGTCACCATTACTATTGATAGCCCATACAGATATTACAGAGAAGTCTGCTGA 62427
|||||||||||| ||||| | || ||||| ||||| || || |||||||| || |
Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634
Query 62428 TTGCTTATCAGAGGTAGCAAAGTCAGTAGTGATATAAAAATTAAAATGCCCTCT----AT 62483
|| || || ||||| |||||||| || |||||||| || || | || |||| |
Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTT-GTAGGCGCTCTTCTGGT 4575
Query 62484 TCAGTAGTAGAGATTTACGTTTATACCACTGAATATCTGACTCAAGAATTAGTCGTTCTT 62543
|||| || | || || || || || || || | || | | || || || |
Sbjct 4574 TCAGAAGCAAAG---CGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCT 4518
Query 62544 CATCAGAAGTAATACGTAACATCAATTCTTGGTTAAATGCAGCTACCTGTCCTGTAGATA 62603
| || || || || || | ||| | || || | || | || |||| || || |
Sbjct 4517 CGTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCA 4458
Query 62604 CAGCAAGGTCATACTGACCTTTAACAAAGTCATAAGAGAATCTGTCTTCCCATGCTCCTA 62663
||||| || ||||| | || || || || | ||| | ||||||||| || || |
Sbjct 4457 CAGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGA 4398
Query 62664 CAAATTCTTCTCTCGTACATGGGAATTTCTCACATATTGGGAATACGTTGACGTACCAAC 62723
|| ||||| | ||||||||| | |||||| | || | |||||||| | |||
Sbjct 4397 TGAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGG 4338
Query 62724 CCCCAGACTCAACAGCTTC-ATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAA 62782
| || || || || || || || | | || || | | || || || ||| ||||
Sbjct 4337 CGCCGGATTCCACCGCCTCGATCATG-ATGTCTTCGGCATGGAAAGGCGTACCATTGAAG 4279
Query 62783 ACAATTTTTCTACGAGTAGGGTCAAGAGCATAGTCTACTCCTTTATACACAGTATCTTTA 62842
|| || || | ||| || || || || || || | || || || || || ||||| ||
Sbjct 4278 ACGATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTG 4219
Query 62843 ATTGCCTGCATTGTGCTCTTAGATTTAGCATCATCATCACTAACCAAATCATCAAGCACA 62902
|| || | ||||| | || || || |||||||| | || || || || |
Sbjct 4218 ATGGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATT 4159
Query 62903 GCTAAAACAGGACGTTTACCAAAGATTTTAGTACCACGTAAACCAGTTTTAGCACCAAAC 62962
|| | || || || || ||||| || ||||| || | |||||| || || ||||||
Sbjct 4158 GCCAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAAC 4099
Query 62963 ATACGAACACCTAACTTATGTCCATCAGCATTAGTAAATTCTAAGTAGGCATCAGTGAAT 63022
|| | || | || ||||| || || || || | || || |||||
Sbjct 4098 ATCTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAG 4039
Query 63023 TTAGCTTCAGGAATGTACTTCTGAAGAAATTCAGAGTTGTTATAGCGATATTCGATGTTT 63082
| || ||||| | | | || || || || || |||| ||||| | || |||||
Sbjct 4038 GTTGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTC 3979
Query 63083 TTTCTTAATGATTTAACCCCGTTTTCCATAGAATCCGAGATATAAATCATACCCTCGATT 63142
|| | || || ||||| ||||| |||||||| | ||| ||||| || ||
Sbjct 3978 TTGCGGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATG 3919
Query 63143 TCACCAAATCCATCAATTTCACCATAAAGTGCTATGTATAAAACTAGATACTCACCAAAT 63202
|| || || || | | || || | || ||| | | ||| ||||| || ||
Sbjct 3918 TCGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAG 3859
Query 63203 AGAGTAGTTTTAGCCATACCACGAGAACATAGATTAGCTAATC 63245
|| || || || ||| |||||| | || ||||| || ||||
Sbjct 3858 AGCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATC 3817
>seq1007
Length=53843
Score = 152 bits (168), Expect = 2e-32
Identities = 678/1063 (64%), Gaps = 17/1063 (2%)
Strand=Plus/Minus
Query 62191 AGAAGCAAAGTTAAACCAGATATTACGTCTCATCATCTCATCCTGAAGTAGAGGGATGAA 62250
|||||| ||||| |||||||| ||||| | ||||| ||||| || ||||||
Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGATGAA 4811
Query 62251 T-CCACCTTGTTGACCTGTAACTTCAATACCTACAGATTGAGGTTGGTATTCAACT--AC 62307
||| || | || || || ||||| | || || || || || | ||| || || ||
Sbjct 4810 GGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGAT--TATACATCTGAAC 4754
Query 62308 CAATCTAAATAAATCATCGAAGTTTTTATCCATAAGCTGACGTCTACAGATACCATCAAC 62367
||| | || | ||||||| || ||||| |||| |||| |||||||||
Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694
Query 62368 CCAGAACCAGTCACCATTACTATTGATAGCCCATACAGATATTACAGAGAAGTCTGCTGA 62427
|||||||||||| ||||| | || ||||| ||||| || || |||||||| || |
Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634
Query 62428 TTGCTTATCAGAGGTAGCAAAGTCAGTAGTGATATAAAAATTAAAATGCCCTCT----AT 62483
|| || || ||||| |||||||| || |||||||| || || | || |||| |
Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTT-GTAGGCGCTCTTCTGGT 4575
Query 62484 TCAGTAGTAGAGATTTACGTTTATACCACTGAATATCTGACTCAAGAATTAGTCGTTCTT 62543
|||| || | || || || || || || || | || | | || || || |
Sbjct 4574 TCAGAAGCAAAG---CGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCT 4518
Query 62544 CATCAGAAGTAATACGTAACATCAATTCTTGGTTAAATGCAGCTACCTGTCCTGTAGATA 62603
| || || || || || | ||| | || || | || | || |||| || || |
Sbjct 4517 CGTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCA 4458
Query 62604 CAGCAAGGTCATACTGACCTTTAACAAAGTCATAAGAGAATCTGTCTTCCCATGCTCCTA 62663
||||| || ||||| | || || || || | ||| | ||||||||| || || |
Sbjct 4457 CAGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGA 4398
Query 62664 CAAATTCTTCTCTCGTACATGGGAATTTCTCACATATTGGGAATACGTTGACGTACCAAC 62723
|| ||||| | ||||||||| | |||||| | || | |||||||| | |||
Sbjct 4397 TGAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGG 4338
Query 62724 CCCCAGACTCAACAGCTTC-ATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAA 62782
| || || || || || || || | | || || | | || || || ||| ||||
Sbjct 4337 CGCCGGATTCCACCGCCTCGATCATG-ATGTCTTCGGCATGGAAAGGCGTACCATTGAAG 4279
Query 62783 ACAATTTTTCTACGAGTAGGGTCAAGAGCATAGTCTACTCCTTTATACACAGTATCTTTA 62842
|| || || | ||| || || || || || || | || || || || || ||||| ||
Sbjct 4278 ACGATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTG 4219
Query 62843 ATTGCCTGCATTGTGCTCTTAGATTTAGCATCATCATCACTAACCAAATCATCAAGCACA 62902
|| || | ||||| | || || || |||||||| | || || || || |
Sbjct 4218 ATGGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATT 4159
Query 62903 GCTAAAACAGGACGTTTACCAAAGATTTTAGTACCACGTAAACCAGTTTTAGCACCAAAC 62962
|| | || || || || ||||| || ||||| || | |||||| || || ||||||
Sbjct 4158 GCCAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAAC 4099
Query 62963 ATACGAACACCTAACTTATGTCCATCAGCATTAGTAAATTCTAAGTAGGCATCAGTGAAT 63022
|| | || | || ||||| || || || || | || || |||||
Sbjct 4098 ATCTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAG 4039
Query 63023 TTAGCTTCAGGAATGTACTTCTGAAGAAATTCAGAGTTGTTATAGCGATATTCGATGTTT 63082
| || ||||| | | | || || || || || |||| ||||| | || |||||
Sbjct 4038 GTTGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTC 3979
Query 63083 TTTCTTAATGATTTAACCCCGTTTTCCATAGAATCCGAGATATAAATCATACCCTCGATT 63142
|| | || || ||||| ||||| |||||||| | ||| ||||| || ||
Sbjct 3978 TTGCGGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATG 3919
Query 63143 TCACCAAATCCATCAATTTCACCATAAAGTGCTATGTATAAAACTAGATACTCACCAAAT 63202
|| || || || | | || || | || ||| | | ||| ||||| || ||
Sbjct 3918 TCGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAG 3859
Query 63203 AGAGTAGTTTTAGCCATACCACGAGAACATAGATTAGCTAATC 63245
|| || || || ||| |||||| | || ||||| || ||||
Sbjct 3858 AGCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATC 3817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 218639205593714
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |