Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_027381.1 Length=68365 Score E Sequences producing significant alignments: (Bits) Value seq1008 152 2e-32 seq1007 152 2e-32 >seq1008 Length=53843 Score = 152 bits (168), Expect = 2e-32 Identities = 678/1063 (64%), Gaps = 17/1063 (2%) Strand=Plus/Minus Query 62191 AGAAGCAAAGTTAAACCAGATATTACGTCTCATCATCTCATCCTGAAGTAGAGGGATGAA 62250 |||||| ||||| |||||||| ||||| | ||||| ||||| || |||||| Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGATGAA 4811 Query 62251 T-CCACCTTGTTGACCTGTAACTTCAATACCTACAGATTGAGGTTGGTATTCAACT--AC 62307 ||| || | || || || ||||| | || || || || || | ||| || || || Sbjct 4810 GGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGAT--TATACATCTGAAC 4754 Query 62308 CAATCTAAATAAATCATCGAAGTTTTTATCCATAAGCTGACGTCTACAGATACCATCAAC 62367 ||| | || | ||||||| || ||||| |||| |||| ||||||||| Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694 Query 62368 CCAGAACCAGTCACCATTACTATTGATAGCCCATACAGATATTACAGAGAAGTCTGCTGA 62427 |||||||||||| ||||| | || ||||| ||||| || || |||||||| || | Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634 Query 62428 TTGCTTATCAGAGGTAGCAAAGTCAGTAGTGATATAAAAATTAAAATGCCCTCT----AT 62483 || || || ||||| |||||||| || |||||||| || || | || |||| | Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTT-GTAGGCGCTCTTCTGGT 4575 Query 62484 TCAGTAGTAGAGATTTACGTTTATACCACTGAATATCTGACTCAAGAATTAGTCGTTCTT 62543 |||| || | || || || || || || || | || | | || || || | Sbjct 4574 TCAGAAGCAAAG---CGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCT 4518 Query 62544 CATCAGAAGTAATACGTAACATCAATTCTTGGTTAAATGCAGCTACCTGTCCTGTAGATA 62603 | || || || || || | ||| | || || | || | || |||| || || | Sbjct 4517 CGTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCA 4458 Query 62604 CAGCAAGGTCATACTGACCTTTAACAAAGTCATAAGAGAATCTGTCTTCCCATGCTCCTA 62663 ||||| || ||||| | || || || || | ||| | ||||||||| || || | Sbjct 4457 CAGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGA 4398 Query 62664 CAAATTCTTCTCTCGTACATGGGAATTTCTCACATATTGGGAATACGTTGACGTACCAAC 62723 || ||||| | ||||||||| | |||||| | || | |||||||| | ||| Sbjct 4397 TGAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGG 4338 Query 62724 CCCCAGACTCAACAGCTTC-ATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAA 62782 | || || || || || || || | | || || | | || || || ||| |||| Sbjct 4337 CGCCGGATTCCACCGCCTCGATCATG-ATGTCTTCGGCATGGAAAGGCGTACCATTGAAG 4279 Query 62783 ACAATTTTTCTACGAGTAGGGTCAAGAGCATAGTCTACTCCTTTATACACAGTATCTTTA 62842 || || || | ||| || || || || || || | || || || || || ||||| || Sbjct 4278 ACGATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTG 4219 Query 62843 ATTGCCTGCATTGTGCTCTTAGATTTAGCATCATCATCACTAACCAAATCATCAAGCACA 62902 || || | ||||| | || || || |||||||| | || || || || | Sbjct 4218 ATGGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATT 4159 Query 62903 GCTAAAACAGGACGTTTACCAAAGATTTTAGTACCACGTAAACCAGTTTTAGCACCAAAC 62962 || | || || || || ||||| || ||||| || | |||||| || || |||||| Sbjct 4158 GCCAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAAC 4099 Query 62963 ATACGAACACCTAACTTATGTCCATCAGCATTAGTAAATTCTAAGTAGGCATCAGTGAAT 63022 || | || | || ||||| || || || || | || || ||||| Sbjct 4098 ATCTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAG 4039 Query 63023 TTAGCTTCAGGAATGTACTTCTGAAGAAATTCAGAGTTGTTATAGCGATATTCGATGTTT 63082 | || ||||| | | | || || || || || |||| ||||| | || ||||| Sbjct 4038 GTTGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTC 3979 Query 63083 TTTCTTAATGATTTAACCCCGTTTTCCATAGAATCCGAGATATAAATCATACCCTCGATT 63142 || | || || ||||| ||||| |||||||| | ||| ||||| || || Sbjct 3978 TTGCGGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATG 3919 Query 63143 TCACCAAATCCATCAATTTCACCATAAAGTGCTATGTATAAAACTAGATACTCACCAAAT 63202 || || || || | | || || | || ||| | | ||| ||||| || || Sbjct 3918 TCGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAG 3859 Query 63203 AGAGTAGTTTTAGCCATACCACGAGAACATAGATTAGCTAATC 63245 || || || || ||| |||||| | || ||||| || |||| Sbjct 3858 AGCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATC 3817 >seq1007 Length=53843 Score = 152 bits (168), Expect = 2e-32 Identities = 678/1063 (64%), Gaps = 17/1063 (2%) Strand=Plus/Minus Query 62191 AGAAGCAAAGTTAAACCAGATATTACGTCTCATCATCTCATCCTGAAGTAGAGGGATGAA 62250 |||||| ||||| |||||||| ||||| | ||||| ||||| || |||||| Sbjct 4870 AGAAGCGAAGTTGAACCAGATGTTACGGACCTGCATCTGCTCCTGCAGCCACTTGATGAA 4811 Query 62251 T-CCACCTTGTTGACCTGTAACTTCAATACCTACAGATTGAGGTTGGTATTCAACT--AC 62307 ||| || | || || || ||||| | || || || || || | ||| || || || Sbjct 4810 GGCCAGCT-GCTGGCCGGTGACTTCGACGCCGACGGACTGCGGAT--TATACATCTGAAC 4754 Query 62308 CAATCTAAATAAATCATCGAAGTTTTTATCCATAAGCTGACGTCTACAGATACCATCAAC 62367 ||| | || | ||||||| || ||||| |||| |||| ||||||||| Sbjct 4753 CAAACGGAACAGTTCATCGATCGACTTGTCCATCGTGGTACGTTCGCAGAAACCATCAAC 4694 Query 62368 CCAGAACCAGTCACCATTACTATTGATAGCCCATACAGATATTACAGAGAAGTCTGCTGA 62427 |||||||||||| ||||| | || ||||| ||||| || || |||||||| || | Sbjct 4693 CCAGAACCAGTCGCCATTCCAGTTATGTGCCCAGACAGAGATGACCGAGAAGTCGGCCGT 4634 Query 62428 TTGCTTATCAGAGGTAGCAAAGTCAGTAGTGATATAAAAATTAAAATGCCCTCT----AT 62483 || || || ||||| |||||||| || |||||||| || || | || |||| | Sbjct 4633 CTGTTTGTCCGAGGTCGCAAAGTCGGTCGTGATATAGAAGTT-GTAGGCGCTCTTCTGGT 4575 Query 62484 TCAGTAGTAGAGATTTACGTTTATACCACTGAATATCTGACTCAAGAATTAGTCGTTCTT 62543 |||| || | || || || || || || || | || | | || || || | Sbjct 4574 TCAGAAGCAAAG---CGCGCTTGTATTCCTTGATCTCCGCATCCTGGACCAGACGCTCCT 4518 Query 62544 CATCAGAAGTAATACGTAACATCAATTCTTGGTTAAATGCAGCTACCTGTCCTGTAGATA 62603 | || || || || || | ||| | || || | || | || |||| || || | Sbjct 4517 CGTCGGAGGTGATCCGGAGCATGAGCTCCTGCATGAAGCCTGCGACCTTGCCGGTGAGCA 4458 Query 62604 CAGCAAGGTCATACTGACCTTTAACAAAGTCATAAGAGAATCTGTCTTCCCATGCTCCTA 62663 ||||| || ||||| | || || || || | ||| | ||||||||| || || | Sbjct 4457 CAGCATTCTCGTACTGCGTTGCAATGAACTCGTAGGTGAAGCGGTCTTCCCAGGCGCCGA 4398 Query 62664 CAAATTCTTCTCTCGTACATGGGAATTTCTCACATATTGGGAATACGTTGACGTACCAAC 62723 || ||||| | ||||||||| | |||||| | || | |||||||| | ||| Sbjct 4397 TGAACTCTTCACGCGTACATGGCCAGCGCTCACAGACCGGCCAGACGTTGACATCCCAGG 4338 Query 62724 CCCCAGACTCAACAGCTTC-ATAAAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAA 62782 | || || || || || || || | | || || | | || || || ||| |||| Sbjct 4337 CGCCGGATTCCACCGCCTCGATCATG-ATGTCTTCGGCATGGAAAGGCGTACCATTGAAG 4279 Query 62783 ACAATTTTTCTACGAGTAGGGTCAAGAGCATAGTCTACTCCTTTATACACAGTATCTTTA 62842 || || || | ||| || || || || || || | || || || || || ||||| || Sbjct 4278 ACGATCTTGCGACGGGTTGGATCGAGTGCGTAATTCACACCCTTGTAGACCGTATCCTTG 4219 Query 62843 ATTGCCTGCATTGTGCTCTTAGATTTAGCATCATCATCACTAACCAAATCATCAAGCACA 62902 || || | ||||| | || || || |||||||| | || || || || | Sbjct 4218 ATGGCATTCATTGCCGCCACGGACTTGGCGTCATCATCCGAGATCAGGTCGTCGAGGATT 4159 Query 62903 GCTAAAACAGGACGTTTACCAAAGATTTTAGTACCACGTAAACCAGTTTTAGCACCAAAC 62962 || | || || || || ||||| || ||||| || | |||||| || || |||||| Sbjct 4158 GCCAGCGGCGGGCGCTTGCCGAAGATCTTCGTACCGCGGATACCAGTCTTGGCGCCAAAC 4099 Query 62963 ATACGAACACCTAACTTATGTCCATCAGCATTAGTAAATTCTAAGTAGGCATCAGTGAAT 63022 || | || | || ||||| || || || || | || || ||||| Sbjct 4098 ATCTTGATGCCGAGACGGTGACCATCCTTGTTGGTGAACTCCAGATAATTGTCGGTGAAG 4039 Query 63023 TTAGCTTCAGGAATGTACTTCTGAAGAAATTCAGAGTTGTTATAGCGATATTCGATGTTT 63082 | || ||||| | | | || || || || || |||| ||||| | || ||||| Sbjct 4038 GTTGCGTCAGGCAGCCATTCCTTCAGGAAGTCGGAATTGTGGTAGCGGAACTCAATGTTC 3979 Query 63083 TTTCTTAATGATTTAACCCCGTTTTCCATAGAATCCGAGATATAAATCATACCCTCGATT 63142 || | || || ||||| ||||| |||||||| | ||| ||||| || || Sbjct 3978 TTGCGGGCGCTCTTGACGCCGTTGTCCATCGAATCCGACACATAGATCATGCCGGTAATG 3919 Query 63143 TCACCAAATCCATCAATTTCACCATAAAGTGCTATGTATAAAACTAGATACTCACCAAAT 63202 || || || || | | || || | || ||| | | ||| ||||| || || Sbjct 3918 TCGCCGAAGCCGGGCAGCACGCCGTAGACGGCAATGAACAGAACCAGATATTCGAAGAAG 3859 Query 63203 AGAGTAGTTTTAGCCATACCACGAGAACATAGATTAGCTAATC 63245 || || || || ||| |||||| | || ||||| || |||| Sbjct 3858 AGCGTGGTCTTGGCCGCACCACGGAAGCAGAGATTGGC-AATC 3817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 218639205593714