Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq890 100 4e-16
seq743 93.3 6e-14
>seq890
Length=125401
Score = 100 bits (110), Expect = 4e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 198335 TGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCT 198394
|| ||||| ||||| || || || || | ||||| |||||||||||||||||||| ||
Sbjct 47298 TGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCC 47239
Query 198395 TACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATT 198454
||||| | || | ||||| |||||| || ||| ||||||||| ||| |
Sbjct 47238 TACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGTC 47179
Query 198455 TGGACGGGCGGTGACACACATCTCTACTCT-AATCATCTGGAGCAGGCCAAGCTCCAGCT 198513
|| ||| ||| | || || || ||| || |||||||| |||||| | || |||||
Sbjct 47178 CATACCTTCGGCGACGCCCACCTGTA-TCTGAACCATCTGGAACAGGCCGAACTTCAGCT 47120
Query 198514 GACGCGTGAGCC 198525
|||||| |||||
Sbjct 47119 GACGCGCGAGCC 47108
Score = 96.9 bits (106), Expect = 5e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 197668 CGATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCG 197727
||| || || || || || || || ||||| || |||||||| || |||||| ||
Sbjct 47722 CGACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGC 47663
Query 197728 TAAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACT 197787
|| || ||||| | | || || ||||| || ||||||||||| || ||| |||||
Sbjct 47662 CAAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACT 47603
Query 197788 GCTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCAT 197847
|||||||||||| | || || ||||||| | | || | || |||||||| |||
Sbjct 47602 GCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCAT 47543
Query 197848 TTGGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTATGG 197895
||| || ||| ||| | | || | ||||||||| | |||||
Sbjct 47542 CTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGG 47495
>seq743
Length=263205
Score = 93.3 bits (102), Expect = 6e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388
|| || || ||||||||||| || || || | || |||||||||||||||||||||
Sbjct 73066 CTCTCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATC 73007
Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448
||||| || || | || | ||| | || ||| | | | | ||||||||||
Sbjct 73006 GCGTCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGATCTTGCGCCGGGCGAT 72947
Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTC 198508
||||| ||| ||| ||| | ||||| || || || |||||||||||||| ||
Sbjct 72946 TTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCGCCTG 72887
Query 198509 CAGCTGACGCG 198519
|| ||||||||
Sbjct 72886 CAACTGACGCG 72876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769179187234920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |