Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq773 91.5 2e-13
seq724 86.0 8e-12
>seq773
Length=230076
Score = 91.5 bits (100), Expect = 2e-13
Identities = 239/358 (67%), Gaps = 14/358 (4%)
Strand=Plus/Minus
Query 14111 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCA 14167
||||| ||||||||||| | | ||| || ||||| ||||| || ||||||||
Sbjct 177172 CGGTTGGTCGCCGCGATCAGGATGAT---CGATTCGTTGGCTTCAAAACCGTCCATCTCG 177116
Query 14168 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCAGGC-ATACCACCCGCA 14224
|| || || |||| ||| ||||||||||| ||||| ||| | | | |||| ||
Sbjct 177115 ACCAGCAGCTGGTTGAGGGTCTGTTCGCGTTCGTCATTACCGCCGCCGAGACCA---GCG 177059
Query 14225 CTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCA 14284
| ||| || ||||||||| || ||||| |||||||| | ||| || || ||| |
Sbjct 177058 CCGCGATGACGACCGACGGCATCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTC 176999
Query 14285 CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACA 14344
||| ||| || || || || || | | || ||||| || || ||||| || ||
Sbjct 176998 TTGGCCTGTTCGAACATGTCACGGACACGGCTCGCGCCGACGCCGACGAACATTTCAACG 176939
Query 14345 AAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGC 14403
|| | | ||||| || | || ||| || || || | ||| || || | | || ||
Sbjct 176938 AAGTCCGAACCGGAA-ATGGTGAAGAACGGCACATTCGCTTCGCCTGCAACAGAGCGCGC 176880
Query 14404 GAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTG 14461
|| || ||||| || || || || || |||| || | ||||| || ||| ||
Sbjct 176879 CAGAAGCGTCTTACCGGTGCCGGGAGGGCCCACGAGCAGCACGCCACGCGGAATCTTG 176822
>seq724
Length=279373
Score = 86.0 bits (94), Expect = 8e-12
Identities = 328/506 (65%), Gaps = 22/506 (4%)
Strand=Plus/Minus
Query 14056 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 14115
|| || ||| || || || || || || || ||||| ||| || | || ||||||
Sbjct 7146 GACCTGACGGTCGAAACGGCCGGGACGCAGCAGGGCCGGGTCCAGCACGTCGGGGCGGTT 7087
Query 14116 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAA 14172
|| || ||||| | | |||| ||||| || |||||||||||||| ||
Sbjct 7086 GGTGGCGGCGATCAGGATGATGT---TCTCGGAGGCTTCGAAGCCATCCATCTCGACCAG 7030
Query 14173 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGT 14230
|| || || | ||| || ||||| || || || | || ||| || || | |||
Sbjct 7029 CAGCTGGTTCAGGGTCTGCTCGCGCTCGTCGTTGCC--GCCGCCCAGGCCTGCGCCGCGA 6972
Query 14231 TGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG----TTGATTTTCACG 14286
|| ||||||||||| |||||||||||||| | ||| || || || |||||
Sbjct 6971 TGACGGCCGACGGCGTCGATTTCATCGATGAAGATGATGCACGGAGCATTCTTTTTC--- 6915
Query 14287 GGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 14346
|| ||| || || || || || | |||| ||||| || || ||||| || || ||
Sbjct 6914 -GCTTGTTCGAACATGTCGCGGACGCGGCTGGCGCCGACGCCGACGAACATTTCGACGAA 6856
Query 14347 ATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGA 14405
| | | | | || | || |||||| ||| | |||||||||| || ||||| |
Sbjct 6855 GTCCGAACCCG-AGATCGAGAAGAAGGGCACGCCCGCCTCACCCGCGACCGCGCGGGCCA 6797
Query 14406 GGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCAC 14465
| || ||||| || || || || || | || ||||| || |||||| || | |
Sbjct 6796 GCAGCGTCTTGCCGGTGCCGGGAGGGCCGACCAGCAGGGCGCCCTTGGGGATCTTGCCGC 6737
Query 14466 CACTGCCAAAGTAGCGT-TCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCC 14524
| | | | | | | | | || | || |||||||| |||| || | || ||| |||
Sbjct 6736 C-CAGACGCTGGAACTTGCCCGGATCCTTCAGGAAGTCGACGACCTCCTGCAGTTCGTCC 6678
Query 14525 TTCGCGGCGTCGATGCCTTCAACGTC 14550
|| || | |||| |||| | || ||
Sbjct 6677 TTGGCCTCATCGACGCCTGCGACATC 6652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618423612070440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |