Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq1494 228 3e-55
>seq1494
Length=1074632
Score = 228 bits (252), Expect = 3e-55
Identities = 645/982 (66%), Gaps = 48/982 (5%)
Strand=Plus/Plus
Query 39706 ACGCCAGCGGTATGCTTCACACTGGTTGCAACCTTGTCCCAGTTGGCTCCGGTGGACAGA 39765
||||| ||||| | ||| | ||||| ||||||||||||||||| | ||||| || |||
Sbjct 584755 ACGCCGGCGGTGTTCTTGATGCTGGTCGCAACCTTGTCCCAGTTCGAGCCGGTCGAGAGA 584814
Query 39766 GCGGCATCATCCGGGGATGCCCCACCATTAGCTACATCCCAGGCATACCCGCGCAGCCCT 39825
||| | || || || || || || | ||||||| || || | |
Sbjct 584815 TCGGAGTTGGTGGGCGACTTGCCGCCGTTGCCTTCGTCCCAGGTGTAGCCCTTGATCGAG 584874
Query 39826 ACGCCGAAGCTGTAGTCGATCTGCAGAGTGGTCTCGATGCGCTCTTTGCCGTTGCTGGTC 39885
| |||||| ||||||| | |||||| |||||||||||||| | |||||||| |||||
Sbjct 584875 AGACCGAAGGTGTAGTCCACCTGCAGCGTGGTCTCGATGCGGTTCTTGCCGTTCGTGGTC 584934
Query 39886 TCGATGTTCGAGATCAGGTCTCGGGCATCGTGGACAGTTGCGGCGCCTTGGGTCAGCGAG 39945
|||| ||| ||||||| ||| | | | || || ||||| ||||| | | |||||||
Sbjct 584935 TCGACGTTGGAGATCACGTCACCGCCGTCAAACACCGTTGCCGCGCCCTCCGCCAGCGAG 584994
Query 39946 AGTACGCGACGCTTGGCAGGAGCAGCCGGATCGGTCACTGCTGGGGTGTAG------AGC 39999
|| || ||| | | || | || || | | ||||||| ||
Sbjct 584995 AGAAC------CTTCTC----GTAG--GTATTGGGC------GAGGTGTAGGACGAAAGT 585036
Query 40000 GCCGGGGCATCGGTCACCACGATCAAGCGACCGAGGATATCCACCACGCGCACGCCGTTG 40059
||||| |||||||| || || | |||||||||||||| | | || | |
Sbjct 585037 GCCGGCGCATCGGTGACAACCACGGCCTTTCCGAGGATATCCACGATGTTGACCGTGCCG 585096
Query 40060 GATTGGAACAGTTGCTGAGCGTTGGTCAGATTCTGGCCAATGAAGGTGTGGAACTGGGCA 40119
| |||||| ||||| |||||||||| |||| || || | | ||| | || |
Sbjct 585097 GCCGTGAACAGGCGCTGATCGTTGGTCAGGTTCTTACCGATCAGGCGGTGATAGGTGGAA 585156
Query 40120 CCATCCATAACTTGCGCGATGAG-CTGGCTAGAGTGGTCGCCGAACAGCGCGTGGCTATC 40178
|| ||| || || || | ||| || || || || |||||| ||||| |
Sbjct 585157 CCGGACATGACCTGAGCAACGAGGCTTGCC-GACGCATCACCGAACTTGGCGTGCGCGCC 585215
Query 40179 GTTGACCGCAATGTAGTCCACTTTCTT---------GGCATCGGACACGTCGACAGTGGT 40229
||||| ||| |||| ||| || |||| | |||||||| | | |
Sbjct 585216 GTTGATCGCGCCGTAGGTCACGGTCGGATCGGGAGAGGCACCCGACACGTC---ATTCTT 585272
Query 40230 AGCGGCGCCTTGGTTGCTGATGGCGGCTACCAGGGCGGCAACGGCTGTGTTCAACTGATC 40289
|||| | |||||| || || | ||||| ||| | || || || | ||||||
Sbjct 585273 CGCGGTGGACTGGTTGGAAATCGCCGTGACCAGAGCGAGGATTGCCGTATTGAGCTGATC 585332
Query 40290 CTGCAGAAGAGACTCGGCGAAGTAGCGGGAGGCGACTTCGACACCTTCAGCAGTCGGCTT 40349
||| | | ||| || |||| |||||| || |||||||| || | ||| |||||
Sbjct 585333 GGCCAGCATCGCCTCCGCAAAGTTGCGGGAAGCCACTTCGACGCCCTGAGCGGTCGGGCG 585392
Query 40350 GCGCAGCCAGGTCATTTGGGATGGTTCGTATCGAACCGGGCCGAAGCCACCAGCCACCTT 40409
||||||||||||| ||| || ||||| || | ||| |||||||| || || | |||
Sbjct 585393 CTGCAGCCAGGTCATCTGGCTAGGCTCGTAACGGATCGGACCGAAGCCGCCCGCGATCTT 585452
Query 40410 GACGGTATTGTGCTTCAGCTGGGTCAGATCAACCGGAGTTACTGCGTC--ATTCGAGCCG 40467
|| | |||||| || | |||||| || ||| | | |||| ||| | ||
Sbjct 585453 CACCGCGGAGTGCTTGAGTTCGGTCAGGTCGGTCGGGGCCGC--CGTCGAATTGGCCGCG 585510
Query 40468 TAGCGGTTCACGCGACGGCGAGCCCC-TGCCAGGCCTGCATAGAAACTGGTT--TGCAGG 40524
|| || | ||||| || | ||| || ||||| | |||| | || || | |
Sbjct 585511 TAACGATCAACGCGGCGCTGTGCCGAGTGGATCGCCTGAA-AGAAC--GATTCCTGGAAG 585567
Query 40525 AAGTCGCCGTCGAAGCCGTCAGTGGTCAGAAGGATCGCGCCACCGGACGCCGCATTGAAT 40584
|| ||||| |||||||| | ||||||||| ||||||| || |||||||| |||||
Sbjct 585568 AAATCGCCATCGAAGCCCTGCGTGGTCAGACGGATCGCTCCGTTCGACGCCGCGTTGAAC 585627
Query 40585 CGCTCAACCATCTGGCTCAGCGTCTCGACGGTGGCCGGCATGAAATAGGTGTTGAACACC 40644
|| ||||||||| ||||||||||| ||| |||||||||| || ||||||| |||
Sbjct 585628 TTCTGAACCATCTGCGCCAGCGTCTCGATGGTCGCCGGCATGATGTACTTGTTGAAGACC 585687
Query 40645 TCCATATCGGAAAGTGCCATGG 40666
| ||| | || || | |||||
Sbjct 585688 TGCATCTGAGAGAGAGACATGG 585709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194815732096478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |