Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028701.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq1095 179 8e-41 >seq1095 Length=1089284 Score = 179 bits (198), Expect = 8e-41 Identities = 342/499 (69%), Gaps = 10/499 (2%) Strand=Plus/Minus Query 27567 GCCTATTACAACGAAATCGATCCCTTCGCCGCGCAATGGCTGCGCAACCTGATCGACGCT 27626 || || ||||||||| | ||||| ||||| ||||| ||||| || ||||| |||| || Sbjct 151506 GCGTACTACAACGAATTTGATCCGTTCGCAGCGCAGTGGCTCCGAAACCTCATCGCTGCC 151447 Query 27627 GGGCACATCGCCCCGGGCGTCGTTGACACTCGCTCAATTGAGGAAGTAACCGCAAATGAC 27686 |||| |||||| || |||| ||||||| || || | || || | | | ||| Sbjct 151446 GGGCTCATCGCGCCAGGCGACGTTGACGAGCGAAGCATCGTCGATGTCAGGCCCGACGAC 151387 Query 27687 CTTAAAGGATTCACGCAATGCCACTTCTTTGCCGGGATCGGTGTGTGGTCTTACGCCCTG 27746 | ||| | ||||||| || ||||| |||||||| || | ||| |||||| || Sbjct 151386 GTGCGAGGCTACACGCAAGCGCATTTCTTCGCCGGGATTGGCGGATGGAGCTACGCCTTG 151327 Query 27747 CGCCGCGCAGGATGGCCCGATGATCGCCCCGTCTGGACAGGTTCATGCCCCTGCCAGCC- 27805 || | |||||||||||| ||||||||| ||||| || || || ||||| ||||| Sbjct 151326 CGGCTCGCAGGATGGCCGGATGATCGCGAATGTTGGACCGGATCCTGTCCCTGTCAGCCG 151267 Query 27806 -TTTCAGCGCCTGCGGAAAGCGACAGGGATTTGACGATCCCCGCCATCATTGGCCCTCAT 27864 |||| | || | |||| ||| |||| | ||| | || | |||||| | | Sbjct 151266 CTTTCGG-GCGCG-GGAAGGCGCAAGGGGCACGCCGACGATAGACACCTGTGGCCCGCTT 151209 Query 27865 GGGGTCAC---CTTATTAAGGTGTGTGCGCCTCACGTTGTCTTTGGGGAACAGGTTGCAA 27921 |||| || || | || ||||| | |||||||| || |||||||| | Sbjct 151208 T---TCACAGCCTCATCGCCGACTGCTCGCCTTCAATCGTCTTTGGAGAGCAGGTTGCGA 151152 Query 27922 GCAAAGACGGCCTCGCATGGCTCGACGCTGTACAGGCTGATCTGGAAAACGCGGATTATG 27981 |||| ||||| | | |||||||| || ||| ||||| |||||| || || |||| Sbjct 151151 GCAAGGACGGACGTGAATGGCTCGCCGGAATACGTGCTGACCTGGAAGACCTGGGATATG 151092 Query 27982 CCTTCGCAGGTTTCGATCTCTGCGCTGCGGGCTTCGGTGCCCCGCACATCCGCCAGCGCC 28041 ||| || | |||||| |||||||||||| |||| || || ||| | ||||| | Sbjct 151091 CCTGCGGGACTGCCGATCTGTGCGCTGCGGGCGTCGGCGCGCCACACCCTAGGCAGCGGC 151032 Query 28042 TCTTCTGGGTGGCCGACGC 28060 | | ||| |||||||||| Sbjct 151031 TGTATTGGTTGGCCGACGC 151013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107105293424898