Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028768.1 Length=49714 Score E Sequences producing significant alignments: (Bits) Value seq998 96.9 1e-15 seq827 86.0 2e-12 >seq998 Length=1052685 Score = 96.9 bits (106), Expect = 1e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 ||||||||||| ||||||||||||| ||||| |||||||| |||||| ||||||||| Sbjct 846666 TGGTCGGAGTAGCAGGATTCGAACCTGCGACCCCCTGCTCCCGAAGCAGGTGCGCTACCG 846725 Query 36141 GACTGCGCTACACTCCGA 36158 | |||||||| ||||||| Sbjct 846726 GGCTGCGCTATACTCCGA 846743 >seq827 Length=173386 Score = 86.0 bits (94), Expect = 2e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 ||||||| | ||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct 172528 TGGTCGGGGCGAGAGGATTCGAACCTCCGACCCTCTGGTCCCAAACCAGATGCGCTACCA 172469 Query 36141 GACTGCGCTACACTCCG 36157 | ||||||||||| ||| Sbjct 172468 GGCTGCGCTACACCCCG 172452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158960370355688