Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028770.1
Length=59878
Score E
Sequences producing significant alignments: (Bits) Value
seq845 120 1e-22
seq713 100 1e-16
>seq845
Length=164897
Score = 120 bits (132), Expect = 1e-22
Identities = 256/380 (67%), Gaps = 2/380 (1%)
Strand=Plus/Minus
Query 5820 GTACGACCTGACCGTCTCCACCGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCATCCA 5879
|| ||| |||||| || | ||| || || || || || ||||| || |||||
Sbjct 111587 GTGCGAGCTGACCTTCGGCGTCGGGCCTGCGGGCACCGGCAAGACGTTTCTGGCGGCGGC 111528
Query 5880 CCACGGCCTGCGCCTGCTGGAGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCCCGC 5939
| | ||| ||||||| | ||| || | | || || ||||||||||| || ||
Sbjct 111527 CTATGGCGCATCCCTGCTGCGGCGCGGACAGGTGGACCGGCTGGTCATCACCCGCCCGGC 111468
Query 5940 CGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACC 5999
|||||||| | |||||||| ||||||||||||||| || |||||||| | | ||
Sbjct 111467 GGTTGAGGCGGGCGAGAAGCTGGGCTTCCTGCCCGGCGACCTGAACGAGAAGGTCGACCC 111408
Query 6000 CTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGC-CCGACGATGACGAAGC 6058
||| || ||||||| ||| ||| ||| ||| | | ||| |||| || | | |||
Sbjct 111407 CTATCTGGCCCCGATCTGGGAGGCGCTGAACGATATTCTGGGCGCCGAGGACG-TGCAGC 111349
Query 6059 GCCTCCTCGAGTCGCGCCAGCTGGAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGT 6118
||| | ||| | || || | || | |||||| | |||| |||||| ||||| ||
Sbjct 111348 GCCGACGCGACAAGGGCGAGATCGAAGCCGCCCCCATCGCCTTCATGCGCGGCCGCACCC 111289
Query 6119 TCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCACCCCGCGCCAGACCGCGC 6178
| | | || | | | || ||| |||||| |||||| || | | | |||| |
Sbjct 111288 TGAGCCACGCCTTCGTCATCGTGGACGAGGCCCAGAACACCTCGCGTCTGCAGATGAAGA 111229
Query 6179 TGCTGGTGACCCGCCTGGGC 6198
|| || ||||||| ||||||
Sbjct 111228 TGGTGCTGACCCGTCTGGGC 111209
>seq713
Length=1192841
Score = 100 bits (110), Expect = 1e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 32328 CCCATATTCCGCCTGTTCGGCTACGCCGGAACTGGCAAGACCACGCTGGCCCGGCACATC 32387
||| | ||||||||||||||||||||||| || ||||||||||| ||||| || || |||
Sbjct 113732 CCCGTGTTCCGCCTGTTCGGCTACGCCGGCACCGGCAAGACCACACTGGCGCGACATATC 113673
Query 32388 GCCGAGGGCATCGACGGCACCGTTCTCTTCGCCGCCCCGACCGGGAAGGCCGC 32440
|| || ||| |||||||| || ||||||||| ||||| ||||| ||
Sbjct 113672 GCGGACGGCGTCGACGGCGAAGTGAAATTCGCCGCCTTCACCGGAAAGGCGGC 113620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191484591393920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |