Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028810.1 Length=52357 Score E Sequences producing significant alignments: (Bits) Value seq743 91.5 5e-14 >seq743 Length=263205 Score = 91.5 bits (100), Expect = 5e-14 Identities = 186/270 (69%), Gaps = 10/270 (4%) Strand=Plus/Plus Query 40240 GCCGCACCTCGCGCTCGGCACCTGCGGCCTTGTCGATGGCTTTGGATACGTTGAGCGACT 40299 || ||||||| || || ||||| || || || || || | ||| || | |||||| Sbjct 30731 GCAGCACCTCACGTTCCGCACCCGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACT 30790 Query 40300 TCGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCT 40359 |||| ||||| | || || | |||| || ||||||||||| || ||||| || || | Sbjct 30791 TCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTT 30850 Query 40360 CGATGGC-CACGGTCAGCCGGTGCCAGGTGCGGGACCCGCCGAAGGCGAGC-AGGTGCCC 40417 |||| || ||| | || ||||| || ||| || ||||||| || ||| | |||||| Sbjct 30851 CGATCGCGCAC-GCCATGCGGTGATAGCCGCGCGATGCGCCGAACGC-AGCGACGTGCCC 30908 Query 40418 ACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACGTCGAAAGCGA---TGCC 40474 || || || || || |||||| || ||| | || | ||| |||| ||| Sbjct 30909 GCCAGGTTTCAGCACGCGCAGGACTTCGGACCAGAATTCTTCCGAGAAGGCGACCTCGCC 30968 Query 40475 CGAGCCGTCCCACTTCTTGCTCATGAATCC 40504 || |||||| | ||||| ||||||||| Sbjct 30969 CG---TGTCCCATTGCTTGCCCATGAATCC 30995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167417819805122