Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028810.1
Length=52357
Score E
Sequences producing significant alignments: (Bits) Value
seq743 91.5 5e-14
>seq743
Length=263205
Score = 91.5 bits (100), Expect = 5e-14
Identities = 186/270 (69%), Gaps = 10/270 (4%)
Strand=Plus/Plus
Query 40240 GCCGCACCTCGCGCTCGGCACCTGCGGCCTTGTCGATGGCTTTGGATACGTTGAGCGACT 40299
|| ||||||| || || ||||| || || || || || | ||| || | ||||||
Sbjct 30731 GCAGCACCTCACGTTCCGCACCCGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACT 30790
Query 40300 TCGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCT 40359
|||| ||||| | || || | |||| || ||||||||||| || ||||| || || |
Sbjct 30791 TCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTT 30850
Query 40360 CGATGGC-CACGGTCAGCCGGTGCCAGGTGCGGGACCCGCCGAAGGCGAGC-AGGTGCCC 40417
|||| || ||| | || ||||| || ||| || ||||||| || ||| | ||||||
Sbjct 30851 CGATCGCGCAC-GCCATGCGGTGATAGCCGCGCGATGCGCCGAACGC-AGCGACGTGCCC 30908
Query 40418 ACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACGTCGAAAGCGA---TGCC 40474
|| || || || || |||||| || ||| | || | ||| |||| |||
Sbjct 30909 GCCAGGTTTCAGCACGCGCAGGACTTCGGACCAGAATTCTTCCGAGAAGGCGACCTCGCC 30968
Query 40475 CGAGCCGTCCCACTTCTTGCTCATGAATCC 40504
|| |||||| | ||||| |||||||||
Sbjct 30969 CG---TGTCCCATTGCTTGCCCATGAATCC 30995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 167417819805122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |