Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value seq1494 82.4 3e-11 >seq1494 Length=1074632 Score = 82.4 bits (90), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 45826 TGGCAGGGATGGGGCACGGCGCTGAAACCATCGTTTGAGCCCGTCGTGGTCGCGCGCAAG 45885 |||| || ||||||||||| |||||||||| | ||||| || ||||||||||| Sbjct 599258 TGGCGAGGCTGGGGCACGGCCTTGAAACCATCTGTGGAGCCGATCTGTCTCGCGCGCAAG 599199 Query 45886 CCTCTCG-TGG-----GCACGGTGGCGGCGAACGTACTGGAGCACGGTACGGGGGCGTTG 45939 ||||| | | | |||||| || |||||| | ||| | ||||| ||||| || | Sbjct 599198 CCTCTGGATAGAAACAACACGGTCGCCGCGAACATCCTGCAACACGGAACGGGCGCCATT 599139 Query 45940 AACATCGACGCCTGCCG 45956 || ||||| |||||||| Sbjct 599138 AATATCGATGCCTGCCG 599122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184726311697664