Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028823.1 Length=58985 Score E Sequences producing significant alignments: (Bits) Value seq743 84.2 8e-12 >seq743 Length=263205 Score = 84.2 bits (92), Expect = 8e-12 Identities = 178/262 (68%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 46609 TTCATGGGCAAGAAGTGGGAC---GGCTCGGGTATCGCCTTCGACGTCGAGATGTGGGAG 46665 |||||||||||| | |||||| ||| || |||||||| | || | ||| Sbjct 30992 TTCATGGGCAAGCAATGGGACACGGGCGAGG---TCGCCTTCTCGGAAGAATTCTGGTCC 30936 Query 46666 CAATGTCTGCGGGTCCTCAAGCCGGGTGGGCATTTGTTGGCCTTCGGCGGCTCCCGCACC 46725 || ||||| || || || || || ||||| | || ||||||| || ||| | Sbjct 30935 GAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGGC 30876 Query 46726 TGGCACCGGATGACCGTG-GCCATCGAGGACGCGGGCTTCGAGATTCGCGACTCCATCGC 46784 | ||||| ||| |||| || ||||| || ||||| || || || |||||||| || Sbjct 30875 TATCACCGCATG-GCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCAT 30817 Query 46785 CTGGCTGAACGGCAGCGGGTTTCCCAAGTCGCTCGACGTGTCCAAGGCCATCGACAAGGC 46844 ||| | | || | |||||||| ||||||| || ||| ||||| || || || || Sbjct 30816 GTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGC 30757 Query 46845 CGCTGGTGCTGAGCGTGAAGTG 46866 || ||||| || ||||| ||| Sbjct 30756 GGCGGGTGCGGAACGTGAGGTG 30735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188627042260986