Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028834.1
Length=48216
Score E
Sequences producing significant alignments: (Bits) Value
seq998 91.5 5e-14
seq827 87.8 6e-13
>seq998
Length=1052685
Score = 91.5 bits (100), Expect = 5e-14
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 36269 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCCA 36328
||||||||||| ||||||||||||| ||||| |||||||| |||||| |||||| ||
Sbjct 846666 TGGTCGGAGTAGCAGGATTCGAACCTGCGACCCCCTGCTCCCGAAGCAGGTGCGCTACCG 846725
Query 36329 GACTGCGCTACACTCCGA 36346
| |||||||| |||||||
Sbjct 846726 GGCTGCGCTATACTCCGA 846743
>seq827
Length=173386
Score = 87.8 bits (96), Expect = 6e-13
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 36268 TTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCC 36327
|||||||| | ||||||||||||| ||||||||| ||||||| |||||||||| ||
Sbjct 172529 TTGGTCGGGGCGAGAGGATTCGAACCTCCGACCCTCTGGTCCCAAACCAGATGCGCTACC 172470
Query 36328 AGACTGCGCTACACTCCG 36345
|| ||||||||||| |||
Sbjct 172469 AGGCTGCGCTACACCCCG 172452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154166855684764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |