Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028889.1 Length=59416 Score E Sequences producing significant alignments: (Bits) Value seq743 86.0 2e-12 >seq743 Length=263205 Score = 86.0 bits (94), Expect = 2e-12 Identities = 172/247 (70%), Gaps = 11/247 (4%) Strand=Plus/Minus Query 47903 TTCATGGGCAAGAAGTGGGAC---GGCTCGGGTATCGCCTTCGATGTCGAGATGTGGGAG 47959 |||||||||||| | |||||| ||| || |||||||| | || | ||| Sbjct 30992 TTCATGGGCAAGCAATGGGACACGGGCGAGG---TCGCCTTCTCGGAAGAATTCTGGTCC 30936 Query 47960 CAATGCCTGCGGGCCCTCAAACCTGGCGGGCACCT-GCTCGCGTTCGGTGGCTCGCGTAC 48018 || |||||| | || ||||||||||||||| | ||| |||||||| | ||||| Sbjct 30935 GAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCGCGG 30877 Query 48019 CTGGCATCGGCTGGCTGTG-GCAATCGAGGACGCGGGCTTCGAGATTCGTGACTCTATCG 48077 || || || |||| ||| || ||||| || ||||| || || || || ||||| || Sbjct 30876 CTATCACCGCATGGC-GTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCA 30818 Query 48078 CGTGGCTGTACGGCAGTGGTTTCCCGAAGTCGCTCGACGTATCCAAGGCCATTGACAAGG 48137 |||| | || || | || || |||||||||| || || ||||| ||||| || | Sbjct 30817 TGTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAG 30758 Query 48138 CAGGCGG 48144 | ||||| Sbjct 30757 C-GGCGG 30752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190006217710364