Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028928.1
Length=53455
Score E
Sequences producing significant alignments: (Bits) Value
seq743 100 1e-16
>seq743
Length=263205
Score = 100 bits (110), Expect = 1e-16
Identities = 186/269 (69%), Gaps = 8/269 (3%)
Strand=Plus/Plus
Query 41191 GCCGCACCTCGCGCTCAGCACCAGCGGCCTTGTCGATGGCCTTGGATACGTTGAGCGACT 41250
|| ||||||| || || ||||| || || || || || ||||| || | ||||||
Sbjct 30731 GCAGCACCTCACGTTCCGCACCCGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACT 30790
Query 41251 TCGGGAACCCGCTGCCGTAGAGCCAGGCGATCGAGTCGCGGATCTCGAAACCGGCGTCCT 41310
|||| ||||| | || || | ||| || |||||||||||| || || || || || |
Sbjct 30791 TCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTT 30850
Query 41311 CGATGGC-CACGGTCAGCCGGTGCCAGGTGCGCGAACCGCCGAACGCCAACATGTGCCCA 41369
|||| || ||| | || ||||| || |||||| |||||||||| | ||||||
Sbjct 30851 CGATCGCGCAC-GCCATGCGGTGATAGCCGCGCGATGCGCCGAACGCAGCGACGTGCCCG 30909
Query 41370 CCCGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACATCGAAAGCGA---TGCCC 41426
|| || || || || |||||| || ||| | || | ||| |||| ||||
Sbjct 30910 CCAGGTTTCAGCACGCGCAGGACTTCGGACCAGAATTCTTCCGAGAAGGCGACCTCGCCC 30969
Query 41427 GAGCCGTCCCACTTCTTGCCCATGAATCC 41455
| |||||| | |||||||||||||||
Sbjct 30970 G---TGTCCCATTGCTTGCCCATGAATCC 30995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170931357260846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |