Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028928.1 Length=53455 Score E Sequences producing significant alignments: (Bits) Value seq743 100 1e-16 >seq743 Length=263205 Score = 100 bits (110), Expect = 1e-16 Identities = 186/269 (69%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 41191 GCCGCACCTCGCGCTCAGCACCAGCGGCCTTGTCGATGGCCTTGGATACGTTGAGCGACT 41250 || ||||||| || || ||||| || || || || || ||||| || | |||||| Sbjct 30731 GCAGCACCTCACGTTCCGCACCCGCCGCTTTATCAATCCCCTTGCTCACATCATGCGACT 30790 Query 41251 TCGGGAACCCGCTGCCGTAGAGCCAGGCGATCGAGTCGCGGATCTCGAAACCGGCGTCCT 41310 |||| ||||| | || || | ||| || |||||||||||| || || || || || | Sbjct 30791 TCGGAAACCCCGTCCCATAAATCCACATGAGCGAGTCGCGGATTTCAAACCCCGCATCTT 30850 Query 41311 CGATGGC-CACGGTCAGCCGGTGCCAGGTGCGCGAACCGCCGAACGCCAACATGTGCCCA 41369 |||| || ||| | || ||||| || |||||| |||||||||| | |||||| Sbjct 30851 CGATCGCGCAC-GCCATGCGGTGATAGCCGCGCGATGCGCCGAACGCAGCGACGTGCCCG 30909 Query 41370 CCCGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACATCGAAAGCGA---TGCCC 41426 || || || || || |||||| || ||| | || | ||| |||| |||| Sbjct 30910 CCAGGTTTCAGCACGCGCAGGACTTCGGACCAGAATTCTTCCGAGAAGGCGACCTCGCCC 30969 Query 41427 GAGCCGTCCCACTTCTTGCCCATGAATCC 41455 | |||||| | ||||||||||||||| Sbjct 30970 G---TGTCCCATTGCTTGCCCATGAATCC 30995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170931357260846