Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028945.1
Length=206713
Score E
Sequences producing significant alignments: (Bits) Value
seq1482 109 7e-19
seq713 96.9 5e-15
>seq1482
Length=483770
Score = 109 bits (120), Expect = 7e-19
Identities = 126/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 181461 GTCAGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCCCAAGAAGACGTCCACGGACCGC 181520
||||| ||||| || || ||||||||||| || | || | |||||| || |||| |||
Sbjct 421931 GTCAGCAGCGCATAGGATGCGATGTTGAACGGCACGCCGAGGAAGACATCAGCGGAGCGC 421872
Query 181521 TGATTCCAAAGGCAGGACAGTTTGTCATTGCGAACATAGAACTGGAATCCGTAGTGGCAC 181580
|||| |||| ||||||||| | ||| ||||||||||| || | | ||||||
Sbjct 421871 TGATAGAGCTGGCACGACAGTTTGCCGTTGGCGACATAGAACTGAAACAGGCAATGGCAC 421812
Query 181581 GGCGGCAAAGCCATTAGATCGACCGCGCCGACATTCCAAGCCGAGACCAT 181630
|| |||| ||||| ||||||| || || |||||| |||||||| ||
Sbjct 421811 GGGGGCAGCGCCATCTTATCGACCTCGGCGGGATTCCACGCCGAGACGAT 421762
>seq713
Length=1192841
Score = 96.9 bits (106), Expect = 5e-15
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 152803 AAAGCTTCTTGTGCTGGACGAATGTTCGATGGTCAATGCGGAAATGCTTCTCGACTTGTT 152862
|||||| | || | |||||||| ||||||||| |||| ||| | | |||| || |
Sbjct 113493 AAAGCTGATCGTCATCGACGAATGCTCGATGGTCGATGCCGAACTCGGCCGCGACCTGAT 113434
Query 152863 TACATTCGAAATTCCGATGCTGGTGCTAGGCGATCCCGGACAGCTTCCGCCAATCGAAGG 152922
| |||||| |||| | ||||||| |||||||||| ||||||||||| || ||||
Sbjct 113433 GTCGTTCGAATGTCCGCTATTGGTGCTCGGCGATCCCGCGCAGCTTCCGCCGATTCAAGG 113374
Query 152923 CAGGAGTCCGCTTACTGATGTTCG-CCCGGATGCGATGTTGACGGAAATCCATCGACAGG 152981
| | || | || ||| | || ||||| |||||| |||| ||| | ||||| ||||
Sbjct 113373 CGGCGGTTTTTTCACCGAT-TCCGAGCCGGACGCGATGCTGACCGAAGTGCATCGTCAGG 113315
Query 152982 CAGAAGGCAACCCGATCATC 153001
| || | | |||||| ||
Sbjct 113314 CCGAGCACGATCCGATCGTC 113295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 661341207886920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |