Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028947.1
Length=62738
Score E
Sequences producing significant alignments: (Bits) Value
seq97 118 4e-22
seq998 82.4 3e-11
seq316 82.4 3e-11
>seq97
Length=479585
Score = 118 bits (130), Expect = 4e-22
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 36369 CGACGTCGTGAACCACCCGGCGCACTACA-CGTCGCATCCCAGCGGAGTCGAGTGCATCA 36427
|||| |||||||| ||| || || |||| || | || || ||||| |||| ||||||
Sbjct 255927 CGACAACGTGAACCGCCCAGCACATTACAACGGC-CACCCAAGCGGTATCGAATGCATCC 255869
Query 36428 CCGTCACTGAGCACATGGGCTTCAACCTCGGCAACGCCGTTAAGTACATCTGGCGCTGCG 36487
| | ||||| ||| ||||||| ||||| || ||| | || ||||||||||||||||
Sbjct 255868 AGATAGCCGAGCATATGAGCTTCAATCTCGGAAATGCCCTAAAATACATCTGGCGCTGCG 255809
Query 36488 ACCTGAAGCGCGACGCGATCGAGGATCTGCGCAAGGCACGGTTCTACATCGACCGTGAAA 36547
| ||||||| ||||| || || || ||| || || || | ||||||||||| ||||
Sbjct 255808 ATCTGAAGCAAGACGCAATTGAAGACCTGGAGAAAGCCCGTTGGTACATCGACCGGGAAA 255749
Query 36548 TC 36549
||
Sbjct 255748 TC 255747
>seq998
Length=1052685
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 650
||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct 267584 TAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGTCCTGC 267641
>seq316
Length=8699
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTGC 650
||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||||
Sbjct 929 TAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGCAGGTTCGAGCCCTGC 986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200633134553761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |