Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028953.1 Length=110764 Score E Sequences producing significant alignments: (Bits) Value seq792 107 1e-18 seq1191 84.2 2e-11 >seq792 Length=204027 Score = 107 bits (118), Expect = 1e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 97628 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACC 97687 || || || || ||||| || ||||| || ||||| | || || ||||||| | Sbjct 144658 GGATCAGTAACAACCGGGGTCAGCAGGTGTGGAATACCATCATAGATGGACAGTTCCAGC 144599 Query 97688 ATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 97747 |||||||| || | |||||| || | || || ||| |||||||||| || Sbjct 144598 ATCTTCGGATCAACCATGATCAGGCGGCATTCTTCCGGCTTGAAACGGTAGAGCAGCGAC 144539 Query 97748 ACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGG 97807 | | ||||| ||||||| | |||||||| || ||||||| ||| |||||||| ||| Sbjct 144538 AGGATCATCGTGTTGATGGCGACCGACTTACCCGAACCGGTGGTGCCTGCCACCAGAAGG 144479 Query 97808 TGCGGCATTTTGGCCAGGTTCAGGGA 97833 || ||||||||||||| |||||| || Sbjct 144478 TGAGGCATTTTGGCCA-GTTCAGCGA 144454 >seq1191 Length=688723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 97616 ACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGG 97674 ||||||| | ||||| || || || || || || || || ||||| |||| || Sbjct 597364 ACCGCCTTCTTCGGG-TCTGTCACGACGGGTGTCAGCAGATGCGGGATGCCGTCATAGAC 597422 Query 97675 GGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGAC-CCGATCAGGATTGGCTC 97733 || |||||| | |||||||||||||| ||||||||| ||| | | || || | | Sbjct 597423 GGAGAGTTCGAGCATCTTCGGGTCGACCATGATGAG-GCGACACTGGTCGGGCCTCAGCC 597481 Query 97734 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGC 97793 ||||||||| || | | ||| | ||| ||| | ||||| || || ||||||| || Sbjct 597482 GGTAGAGCAGCGACAGGATCATGGTGTTAATGCCGACCGACTTGCCCGAGCCGGTGGTGC 597541 Query 97794 CAGCCACCAGCAGGTGCGGCAT 97815 | || | |||||| |||||||| Sbjct 597542 CGGCGATCAGCAGATGCGGCAT 597563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354313526905775