Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028953.1
Length=110764
Score E
Sequences producing significant alignments: (Bits) Value
seq792 107 1e-18
seq1191 84.2 2e-11
>seq792
Length=204027
Score = 107 bits (118), Expect = 1e-18
Identities = 148/206 (72%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 97628 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACC 97687
|| || || || ||||| || ||||| || ||||| | || || ||||||| |
Sbjct 144658 GGATCAGTAACAACCGGGGTCAGCAGGTGTGGAATACCATCATAGATGGACAGTTCCAGC 144599
Query 97688 ATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 97747
|||||||| || | |||||| || | || || ||| |||||||||| ||
Sbjct 144598 ATCTTCGGATCAACCATGATCAGGCGGCATTCTTCCGGCTTGAAACGGTAGAGCAGCGAC 144539
Query 97748 ACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGG 97807
| | ||||| ||||||| | |||||||| || ||||||| ||| |||||||| |||
Sbjct 144538 AGGATCATCGTGTTGATGGCGACCGACTTACCCGAACCGGTGGTGCCTGCCACCAGAAGG 144479
Query 97808 TGCGGCATTTTGGCCAGGTTCAGGGA 97833
|| ||||||||||||| |||||| ||
Sbjct 144478 TGAGGCATTTTGGCCA-GTTCAGCGA 144454
>seq1191
Length=688723
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/202 (71%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 97616 ACCGCCT-CGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGG 97674
||||||| | ||||| || || || || || || || || ||||| |||| ||
Sbjct 597364 ACCGCCTTCTTCGGG-TCTGTCACGACGGGTGTCAGCAGATGCGGGATGCCGTCATAGAC 597422
Query 97675 GGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGAC-CCGATCAGGATTGGCTC 97733
|| |||||| | |||||||||||||| ||||||||| ||| | | || || | |
Sbjct 597423 GGAGAGTTCGAGCATCTTCGGGTCGACCATGATGAG-GCGACACTGGTCGGGCCTCAGCC 597481
Query 97734 GGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGC 97793
||||||||| || | | ||| | ||| ||| | ||||| || || ||||||| ||
Sbjct 597482 GGTAGAGCAGCGACAGGATCATGGTGTTAATGCCGACCGACTTGCCCGAGCCGGTGGTGC 597541
Query 97794 CAGCCACCAGCAGGTGCGGCAT 97815
| || | |||||| ||||||||
Sbjct 597542 CGGCGATCAGCAGATGCGGCAT 597563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354313526905775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |