Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_028954.1 Length=36065 Score E Sequences producing significant alignments: (Bits) Value seq743 96.9 8e-16 >seq743 Length=263205 Score = 96.9 bits (106), Expect = 8e-16 Identities = 128/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 28781 GGGTTCATGGGCAAGGAATGGGACGGCGGCGACATAGCTTT-TCGCCCCGAGACGTGGGC 28839 || |||||||||||| |||||||| ||||| | || || ||| | | ||| | Sbjct 30995 GGATTCATGGGCAAGCAATGGGACACGGGCGAGGTCGCCTTCTCGGAAGAATTC-TGGTC 30937 Query 28840 CGAGGTCCTGCGCGTCCTGAAGCCCGGCGCGCATCTGGCCGCCTTCAACCATTCGCGGAC 28899 ||| ||||||||||| ||||| || |||| ||| | || || ||| | ||||| Sbjct 30936 CGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGG 30877 Query 28900 GTGGCACCGCATGACGGCCGCAATCGAGGATGCGGGCTTTGAAATCCGCGATTCG 28954 | ||||||||| || ||| ||||| |||||||| |||||||||||||| ||| Sbjct 30876 CTATCACCGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCG 30822 Score = 84.2 bits (92), Expect = 5e-12 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 29165 GGGTGGGGAACCGCGCTGAAACCGGCTTTTGAACCTATCGTCCTTGCCCGCAAGCCGCTG 29224 || |||||||||||||| ||||| || || ||||| || ||||| || |||||||||||| Sbjct 30599 GGATGGGGAACCGCGCTCAAACCCGCCTTCGAACCCATTGTCCTCGCGCGCAAGCCGCTG 30540 Query 29225 GCCGAAACATCGGTGGCGCGCCAATTCACCGCG-ACCGGCACCGGCGCGCTGAACATTGA 29283 | ||| |||| || |||||| | ||| ||||| ||||||||||| ||||| Sbjct 30539 TCAGAAGGCACGGTTGC-CGCCAACGTGCTGCGCTGGGGCACGGGCGCGCTGAATATTGA 30481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115284347830026