Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_028954.1
Length=36065
Score E
Sequences producing significant alignments: (Bits) Value
seq743 96.9 8e-16
>seq743
Length=263205
Score = 96.9 bits (106), Expect = 8e-16
Identities = 128/175 (73%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 28781 GGGTTCATGGGCAAGGAATGGGACGGCGGCGACATAGCTTT-TCGCCCCGAGACGTGGGC 28839
|| |||||||||||| |||||||| ||||| | || || ||| | | ||| |
Sbjct 30995 GGATTCATGGGCAAGCAATGGGACACGGGCGAGGTCGCCTTCTCGGAAGAATTC-TGGTC 30937
Query 28840 CGAGGTCCTGCGCGTCCTGAAGCCCGGCGCGCATCTGGCCGCCTTCAACCATTCGCGGAC 28899
||| ||||||||||| ||||| || |||| ||| | || || ||| | |||||
Sbjct 30936 CGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGG 30877
Query 28900 GTGGCACCGCATGACGGCCGCAATCGAGGATGCGGGCTTTGAAATCCGCGATTCG 28954
| ||||||||| || ||| ||||| |||||||| |||||||||||||| |||
Sbjct 30876 CTATCACCGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCG 30822
Score = 84.2 bits (92), Expect = 5e-12
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 29165 GGGTGGGGAACCGCGCTGAAACCGGCTTTTGAACCTATCGTCCTTGCCCGCAAGCCGCTG 29224
|| |||||||||||||| ||||| || || ||||| || ||||| || ||||||||||||
Sbjct 30599 GGATGGGGAACCGCGCTCAAACCCGCCTTCGAACCCATTGTCCTCGCGCGCAAGCCGCTG 30540
Query 29225 GCCGAAACATCGGTGGCGCGCCAATTCACCGCG-ACCGGCACCGGCGCGCTGAACATTGA 29283
| ||| |||| || |||||| | ||| ||||| ||||||||||| |||||
Sbjct 30539 TCAGAAGGCACGGTTGC-CGCCAACGTGCTGCGCTGGGGCACGGGCGCGCTGAATATTGA 30481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 115284347830026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |