Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq743 91.5 2e-13 seq890 84.2 2e-11 >seq743 Length=263205 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 78484 GCGATAATATGCGTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACA 78543 ||||| || |||||| || || ||||| ||||| |||||||||| || | || || Sbjct 72975 GCGATCATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACGGCACGCCGAGAAACACG 73034 Query 78544 TCAACCGAACGCTGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAG 78603 || ||||||||||||| ||| || ||||| ||||| ||| ||||||||| Sbjct 73035 TCGGCCGAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCGCGACGTAGAACTGGAAC 73094 Query 78604 AAACAGTGACACGGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACG 78663 | || || || || ||| ||||| | ||| | ||| | || ||||||||| ||| Sbjct 73095 AGGCAATGGCATGGCGGCAGCGCCATGTGATCGACATCGGCCGGATTCCATGCGCTGACG 73154 Query 78664 ATGATC--CCGCGATCGTCTGGCGTGGT 78689 || | | |||||| || |||||||| Sbjct 73155 ATCAGCCGCCGCGA--ATCCGGCGTGGT 73180 >seq890 Length=125401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 ||||| || |||||||||||||| |||||||||| || | ||||| || | |||| Sbjct 47225 GTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCGCTACGC 47284 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615 |||||| ||| ||||| |||| |||| ||||||||| | ||||| ||| Sbjct 47285 TGATACAGCTGGCAGCTGAGTTTTCCGTCTGCGACGAAGAACTGGAACAGGCAGTGGCAC 47344 Query 78616 GGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATG 78666 || ||| ||||| | |||| || | |||||||| ||| |||||| Sbjct 47345 GGCGGCAGGGCCATGTCGTCCACGTCCGCCGGGTTCCAGGCGCTGACGATG 47395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568462948225920