Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_029013.1
Length=177688
Score E
Sequences producing significant alignments: (Bits) Value
seq743 91.5 2e-13
seq890 84.2 2e-11
>seq743
Length=263205
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 78484 GCGATAATATGCGTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACA 78543
||||| || |||||| || || ||||| ||||| |||||||||| || | || ||
Sbjct 72975 GCGATCATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACGGCACGCCGAGAAACACG 73034
Query 78544 TCAACCGAACGCTGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAG 78603
|| ||||||||||||| ||| || ||||| ||||| ||| |||||||||
Sbjct 73035 TCGGCCGAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCGCGACGTAGAACTGGAAC 73094
Query 78604 AAACAGTGACACGGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACG 78663
| || || || || ||| ||||| | ||| | ||| | || ||||||||| |||
Sbjct 73095 AGGCAATGGCATGGCGGCAGCGCCATGTGATCGACATCGGCCGGATTCCATGCGCTGACG 73154
Query 78664 ATGATC--CCGCGATCGTCTGGCGTGGT 78689
|| | | |||||| || ||||||||
Sbjct 73155 ATCAGCCGCCGCGA--ATCCGGCGTGGT 73180
>seq890
Length=125401
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555
||||| || |||||||||||||| |||||||||| || | ||||| || | ||||
Sbjct 47225 GTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCGCTACGC 47284
Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615
|||||| ||| ||||| |||| |||| ||||||||| | ||||| |||
Sbjct 47285 TGATACAGCTGGCAGCTGAGTTTTCCGTCTGCGACGAAGAACTGGAACAGGCAGTGGCAC 47344
Query 78616 GGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATG 78666
|| ||| ||||| | |||| || | |||||||| ||| ||||||
Sbjct 47345 GGCGGCAGGGCCATGTCGTCCACGTCCGCCGGGTTCCAGGCGCTGACGATG 47395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568462948225920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |