Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_029044.1 Length=154434 Score E Sequences producing significant alignments: (Bits) Value seq1155 86.0 6e-12 seq763 82.4 8e-11 >seq1155 Length=1012 Score = 86.0 bits (94), Expect = 6e-12 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 90718 CACCA-CGGGGTGTAGTTCAG--TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 90774 ||||| |||| ||| | |||| ||| |||||||| ||||||||||| ||| |||||||| Sbjct 433 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 492 Query 90775 TTCGAATCCTGTCACCCCGAC 90795 ||||||||||||| |||||| Sbjct 493 TTCGAATCCTGTCTTCCCGAC 513 >seq763 Length=251843 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 113102 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 113161 ||| |||||| || || |||| |||| ||| ||| || ||||||||||||| | Sbjct 12332 GCCAGGGCCGGGGATCGGCCGCCAACTCGGCCGTCTGCTATGTGCTGGGCATCACCTCCA 12273 Query 113162 TCGACCC-GATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGAC 113220 ||||||| || | ||||||| ||||||||||||| || | ||| |||| ||| Sbjct 12272 TCGACCCTGAACGCA-ACGACCTCCTGTTCGAGCGCTTCGTCTCCGAGGAGCGCCGCGAA 12214 Query 113221 TTCCCCGACATCGACGTCGACTTCCAG 113247 ||||||||||||||||| ||| || Sbjct 12213 CCGCCCGACATCGACGTCGATTTCGAG 12187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494051542535760