Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_029059.1 Length=51492 Score E Sequences producing significant alignments: (Bits) Value seq1494 82.4 3e-11 >seq1494 Length=1074632 Score = 82.4 bits (90), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 40155 CGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGTACGTTCGCCGCCACCGTG 40214 |||||||| ||||| || | || ||||| ||||| | ||| | |||||| || |||||| Sbjct 599122 CGGCAGGCATCGATATTAATGGCGCCCGTTCCGTGTTGCAGGATGTTCGCGGCGACCGTG 599181 Query 40215 C-----CCA-CGAGAGGCTTGCGCGCGACCACGATCGGCTCAAACGCCGGTTTCAGCGAC 40268 | | | |||||||||||||||| ||||||||| | | ||||||| | | Sbjct 599182 TTGTTTCTATCCAGAGGCTTGCGCGCGAGACAGATCGGCTCCACAGATGGTTTCAAGGCC 599241 Query 40269 GTGCCCCAGCCCTGCCA 40285 ||||||||||| |||| Sbjct 599242 GTGCCCCAGCCTCGCCA 599258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164649869077252