Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq592 251 6e-62
>seq592
Length=6384
Score = 251 bits (278), Expect = 6e-62
Identities = 450/650 (69%), Gaps = 8/650 (1%)
Strand=Plus/Minus
Query 48714 AATAGCCTCTTTGACTTCATTTGCATTTCCCACTTCATATCCTAATGGCTGATTCATATC 48773
|||| | |||| | ||| |||||| || | | | |||||| |||| |||||||||
Sbjct 2785 AATAACTTCTTGTAATTCTAGTGCATTACCAATTGTTTGTCCTAAAGGCTTATTCATATC 2726
Query 48774 TGTAATGACTGCA--ATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTCTTGT 48831
|||| | ||| ||| ||||| ||| | | ||| ||||||| |||||| || |
Sbjct 2725 ACTAATAATAGCATAATTTTTTTT--ATTAAAAGCTTTACCAATATGTACCATTAATTTT 2668
Query 48832 GCTAATGCTTTAG-AGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAACATC 48890
||||| | | | ||| | ||| | | ||| || || ||||| ||||| ||
Sbjct 2667 GCTAACTTTCTTGCAGT-TACTATATCCTGAACAAAGGCACCTTTTCCACATTTAATGTC 2609
Query 48891 TAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAATTAA 48950
|| || |||| ||| || ||||| || ||||||||| ||||| ||| |||||||||
Sbjct 2608 TAGTAAAATTAAATCAGCACCCATCGCTATTTTTTTAGACATAACACTAGCAGCAATTAA 2549
Query 48951 TGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGCAGG 49010
||| | ||||| ||||||||| | |||||| |||||||||||||||||||| || |||||
Sbjct 2548 TGGTAATGAATCAACTGTTCCTGAAACATCACGTAATGCATATAATTTTTTATCAGCAGG 2489
Query 49011 CACTAAAATTCCACTTTGTCCAACTAATGC-GATTTTATGTGTATTAACTTGATTAATAA 49069
||||||| | | | |||| | || |||| | || | | ||||||| |||||||
Sbjct 2488 CACTAAATTACTAGTTTGACTAA-TAATACTCATACCAACTTTATTAACAACTTTAATAA 2430
Query 49070 ATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGTTC 49129
| | | | ||| || || ||||| | | || ||| ||||| ||||| || |
Sbjct 2429 AATCTGATATTGCCAAATCACATTTAAAATTTGGAATTATTTCCAATTTATCAATAGTAC 2370
Query 49130 CTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGCAA 49189
| || || || || ||||| || || ||||| ||||| | || ||| ||||
Sbjct 2369 CACCAGTAATACCCAATCCTCTTCCAGAAATTTTTGCAACCTTTAATCCACAAGCAGCAG 2310
Query 49190 CCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTTATCTA 49249
| |||||| ||| | ||||||| ||||||| || || ||||| || ||||||||||| |
Sbjct 2309 CTAATGGACCAAATACTAAACTAGTTTTATCACCAACACCACCAGTTGAATGTTTATCAA 2250
Query 49250 CTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTAATCATGGCATTAG 49309
| | ||| |||| ||||| || || ||||||||| |||||| | || || |
Sbjct 2249 TACTAAAACCAGTAATTTGTGATAAATCCATGGTTTCACCACTATTAATAACGGTTTTTG 2190
Query 49310 TTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCCATT 49359
| | | | ||| || |||| ||| || | ||||||| ||||||
Sbjct 2189 TATATTCTACTAATTCATCATTAGTCATTCCCTGAAAATAAACAGCCATT 2140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452017130170320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |