Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_029079.1
Length=75339
Score E
Sequences producing significant alignments: (Bits) Value
seq931 325 2e-84
seq998 280 7e-71
seq1095 264 5e-66
seq743 84.2 1e-11
>seq931
Length=105225
Score = 325 bits (360), Expect = 2e-84
Identities = 533/762 (70%), Gaps = 7/762 (1%)
Strand=Plus/Minus
Query 66096 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 66154
|||||||| | | ||||||| || ||||||||||| || | || | |||| ||||
Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314
Query 66155 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 66214
| | || | | |||||| ||||| || || ||| | || ||| || ||| |||||||
Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254
Query 66215 CAATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACCC 66274
| | ||||||| || ||| ||| |||| | | ||||| || ||| | ||||||||
Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194
Query 66275 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 66334
| || ||| || ||| || || | || || | || ||||| ||||| |||||
Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134
Query 66335 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66394
||||||||||| ||||||||||| ||| || || || |||| || ||||||
Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074
Query 66395 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66454
|| || ||||| || || |||||| |||||||| || |||||||||| || || ||
Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014
Query 66455 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 66514
||| | || || || || || || ||| ||||| |||||||||| |||| | |
Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954
Query 66515 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66573
||||||| | || | || | || | |||||||| | || | |||||||||
Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895
Query 66574 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 66633
| || ||||| || || ||||| ||||||||||| || ||| |||||||||||
Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838
Query 66634 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 66693
| || || |||| |||| |||| || | | ||| | ||||||||| |||||||
Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778
Query 66694 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGT 66753
|| |||||| || ||||| |||||||||||| | ||||||||| |||| | | | |
Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718
Query 66754 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 66813
|| | || ||||||| || |||||||| || ||| || ||||||||| |||
Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658
Query 66814 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66855
| |||| || | ||||| ||||| |||||||| ||||
Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616
>seq998
Length=1052685
Score = 280 bits (310), Expect = 7e-71
Identities = 514/750 (69%), Gaps = 5/750 (1%)
Strand=Plus/Plus
Query 66099 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 66158
||||| ||| || ||| ||| || ||| |||| ||| |||| ||||||||||||
Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365
Query 66159 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 66218
|| || ||||| || ||||| || || ||| | || ||| || || |||||||| |
Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425
Query 66219 GCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66278
||||||||| || |||| | ||||| ||||||||| || || | |||||||| |
Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485
Query 66279 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66338
|| ||| |||||| || | |||| | || || | ||||| ||| ||||
Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545
Query 66339 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 66398
|| ||||| || ||||||| || || || || |||| | || | | | ||
Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605
Query 66399 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 66458
|| || || || || || || |||||||||||||| ||||| || || || || |||
Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665
Query 66459 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC 66518
| || |||| |||||| | ||| ||||| |||||||||| || | | |||
Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725
Query 66519 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 66578
|| || |||| || | ||| |||||||| | ||| ||||||||| |||
Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782
Query 66579 GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 66638
|||||| || || ||||| ||||||||||| || ||| ||||| ||||| |||
Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842
Query 66639 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 66698
||| | || | || ||||||| | | ||||| |||| |||| |||||||| |
Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902
Query 66699 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCC 66758
||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| |
Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962
Query 66759 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 66817
|| ||||||| ||||| |||| | || || ||| ||||||| || | ||| |
Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021
Query 66818 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66847
||| | || ||||||| |||||||||||
Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051
>seq1095
Length=1089284
Score = 264 bits (292), Expect = 5e-66
Identities = 504/739 (68%), Gaps = 5/739 (1%)
Strand=Plus/Minus
Query 66111 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66170
|||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| |||||
Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708
Query 66171 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCCCAGAAGGCC 66230
|| ||||| || || ||| | || ||| || || ||||| | || ||||||
Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648
Query 66231 GGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66290
|| |||| |||| |||||| || || ||| | || || || | || ||| |
Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588
Query 66291 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66350
||||| || | ||||| | || || | ||||| ||| ||| |||||||| |||
Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528
Query 66351 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66410
|| || | || || || || |||| | || | | | || | || || |||
Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468
Query 66411 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 66469
|| || |||||||| |||||||| ||||||||||| || || || || | |||| |
Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409
Query 66470 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 66529
||| || || || ||| ||||| |||||||||| || | | | ||| || ||||
Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349
Query 66530 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 66589
||| || | | | |||||||| | ||| ||||||||| ||| || ||| |
Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292
Query 66590 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 66649
| || |||||||| |||||||| || ||| ||||||||| || || || | || |
Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232
Query 66650 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 66709
||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || ||
Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172
Query 66710 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGG 66769
||| || |||||||||||||| |||||| | | | ||| ||| | || |||||||
Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112
Query 66770 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 66829
||||| | ||| || |||| |||||||||| | ||| | ||| | || |
Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052
Query 66830 GAAGTCGGGCGCCTGGTTC 66848
||||||||||||||||||
Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033
>seq743
Length=263205
Score = 84.2 bits (92), Expect = 1e-11
Identities = 182/266 (68%), Gaps = 10/266 (4%)
Strand=Plus/Minus
Query 58348 GGATTCATGGGCAAGAAGTGGGACGGCTCGGGC---ATCGCTTTCGATGTCGAGATGTGG 58404
||||||||||||||| | ||||| | ||||| |||| ||| | || | |||
Sbjct 30995 GGATTCATGGGCAAGCAATGGGA---CACGGGCGAGGTCGCCTTCTCGGAAGAATTCTGG 30939
Query 58405 GAGCAATGTCTGCGGGTCCTCAAGCCGGGTGGGCACCT-GCTCGCCTTCGGCGGCTCCCG 58463
|| ||||| || || || || || |||||| | ||| || ||||||| || ||
Sbjct 30938 TCCGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCG 30880
Query 58464 CACCTGGCACCGGCTGACCGTG-GCCATCGAGGACGCGGGCTTCGAGATTCGTGACTCCA 58522
| || ||||| || |||| || ||||| || ||||| || || || || |||||
Sbjct 30879 CGGCTATCACCGCATG-GCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGC 30821
Query 58523 TCGCGTGGCTCTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTATCGAAGGCCATCGACA 58582
|| |||| | || || | ||||| |||||||||| || || |||| || || |
Sbjct 30820 TCATGTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATA 30761
Query 58583 AGGCCGCTGGTGCTGAGCGCGAGGTG 58608
| || || ||||| || || ||||||
Sbjct 30760 AAGCGGCGGGTGCGGAACGTGAGGTG 30735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 240955597886700
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