Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq931 325 2e-84 seq998 271 4e-68 seq1095 269 1e-67 seq743 84.2 1e-11 >seq931 Length=105225 Score = 325 bits (360), Expect = 2e-84 Identities = 533/762 (70%), Gaps = 7/762 (1%) Strand=Plus/Minus Query 65760 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 65818 |||||||| | | ||||||| || ||||||||||| || | || | |||| |||| Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314 Query 65819 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 65878 | | || | | |||||| ||||| || || ||| | || ||| || ||| ||||||| Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254 Query 65879 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 65938 | | |||||| || ||| |||||||| | | ||||| || ||| | |||||||| Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194 Query 65939 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 65998 | || ||| || ||| || || | || || | || ||||| ||||| ||||| Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134 Query 65999 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66058 ||||||||||| ||||||||||| ||| || || || |||| || |||||| Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074 Query 66059 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66118 || || ||||| || || |||||| |||||||| || |||||||||| || || || Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014 Query 66119 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 66178 ||| | || || || || || || ||| ||||| |||||||||| |||| | | Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954 Query 66179 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 66237 ||||||| | || | || | || | |||||||| | || | ||||||||| Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895 Query 66238 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 66297 | || ||||| || || ||||| ||||||||||| || ||| ||||||||||| Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838 Query 66298 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 66357 | || || |||| |||| |||| || | | ||| | ||||||||| ||||||| Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778 Query 66358 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 66417 || |||||| || ||||| |||||||||||| | ||||||||| |||| | | | | Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718 Query 66418 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 66477 || | || ||||||| || |||||||| || ||| || ||||||||| ||| Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658 Query 66478 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66519 | |||| || | ||||| ||||| |||||||| |||| Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616 >seq998 Length=1052685 Score = 271 bits (300), Expect = 4e-68 Identities = 512/750 (68%), Gaps = 5/750 (1%) Strand=Plus/Plus Query 65763 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 65822 ||||| ||| || ||| ||| || ||| |||| ||| |||| |||||||||||| Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365 Query 65823 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 65882 || || ||||| || ||||| || || ||| | || ||| || || |||||||| | Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425 Query 65883 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65942 || |||||| || |||| | |||| ||||||||| || || | |||||||| | Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485 Query 65943 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66002 || ||| |||||| || | |||| | || || | ||||| ||| |||| Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545 Query 66003 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 66062 || ||||| || ||||||| || || || || |||| | || | | | || Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605 Query 66063 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 66122 || || || || || || || |||||||||||||| ||||| || || || || ||| Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665 Query 66123 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATC 66182 | || |||| |||||| | ||| ||||| |||||||||| || | | ||| Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725 Query 66183 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 66242 || || |||| || | ||| |||||||| | ||| ||||||||| ||| Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782 Query 66243 GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 66302 |||||| || || ||||| ||||||||||| || ||| ||||| ||||| ||| Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842 Query 66303 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 66362 ||| | || | || ||||||| | | ||||| |||| |||| |||||||| | Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902 Query 66363 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 66422 ||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| | Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962 Query 66423 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 66481 || ||||||| ||||| |||| | || || ||| ||||||| || | ||| | Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021 Query 66482 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 66511 ||| | || ||||||| ||||||||||| Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051 >seq1095 Length=1089284 Score = 269 bits (298), Expect = 1e-67 Identities = 505/739 (68%), Gaps = 5/739 (1%) Strand=Plus/Minus Query 65775 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65834 |||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| ||||| Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708 Query 65835 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65894 || ||||| || || ||| | || ||| || || ||||| | || |||||| Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648 Query 65895 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65954 || |||| ||||| |||||| || || ||| | || || || | || ||| | Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588 Query 65955 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66014 ||||| || | ||||| | || || | ||||| ||| ||| |||||||| ||| Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528 Query 66015 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66074 || || | || || || || |||| | || | | | || | || || ||| Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468 Query 66075 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 66133 || || |||||||| |||||||| ||||||||||| || || || || | |||| | Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409 Query 66134 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA 66193 ||| || || || ||| ||||| |||||||||| || | | | ||| || |||| Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349 Query 66194 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 66253 ||| || | | | |||||||| | ||| ||||||||| ||| || ||| | Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292 Query 66254 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 66313 | || |||||||| |||||||| || ||| ||||||||| || || || | || | Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232 Query 66314 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 66373 ||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || || Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172 Query 66374 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 66433 ||| || |||||||||||||| |||||| | | | ||| ||| | || ||||||| Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112 Query 66434 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 66493 ||||| | ||| || |||| |||||||||| | ||| | ||| | || | Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052 Query 66494 GAAGTCGGGCGCCTGGTTC 66512 |||||||||||||||||| Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033 >seq743 Length=263205 Score = 84.2 bits (92), Expect = 1e-11 Identities = 182/266 (68%), Gaps = 10/266 (4%) Strand=Plus/Minus Query 58012 GGATTCATGGGCAAGAAGTGGGACGGCTCGGGC---ATCGCTTTCGATGTCGAGATGTGG 58068 ||||||||||||||| | ||||| | ||||| |||| ||| | || | ||| Sbjct 30995 GGATTCATGGGCAAGCAATGGGA---CACGGGCGAGGTCGCCTTCTCGGAAGAATTCTGG 30939 Query 58069 GAGCAATGTCTGCGGGTCCTCAAGCCGGGTGGGCACCT-GCTCGCCTTCGGCGGCTCCCG 58127 || ||||| || || || || || |||||| | ||| || ||||||| || || Sbjct 30938 TCCGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCG 30880 Query 58128 CACCTGGCACCGGCTGACCGTG-GCCATCGAGGACGCGGGCTTCGAGATTCGTGACTCCA 58186 | || ||||| || |||| || ||||| || ||||| || || || || ||||| Sbjct 30879 CGGCTATCACCGCATG-GCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGC 30821 Query 58187 TCGCGTGGCTCTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTATCGAAGGCCATCGACA 58246 || |||| | || || | ||||| |||||||||| || || |||| || || | Sbjct 30820 TCATGTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATA 30761 Query 58247 AGGCCGCTGGTGCTGAGCGCGAGGTG 58272 | || || ||||| || || |||||| Sbjct 30760 AAGCGGCGGGTGCGGAACGTGAGGTG 30735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242417971170023