Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1121 170 2e-37 >seq1121 Length=1158 Score = 170 bits (188), Expect = 2e-37 Identities = 209/281 (74%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 126089 ATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTT 126148 ||||||||| ||||| || || |||||||| ||||| || | || | |||||| || Sbjct 1151 ATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAGCCACATATTTG 1092 Query 126149 TGC-AACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATA 126207 ||| |||| || ||| | ||| |||||| |||||||| |||||||| |||||||| | Sbjct 1091 TGCTAACATTAT-TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTAAAAAAA 1033 Query 126208 TATCAGCACTTCTTTGATATAATTGACAATTTAA---TTTACCCTCTTGTACGTAAAATT 126264 |||| ||||| | |||||||||||||||| ||| |||| | || |||||||||| Sbjct 1032 TATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGTAAAATT 973 Query 126265 GAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTG 126324 ||| | || || || ||||||| |||||| | ||||| | |||||| ||| ||| Sbjct 972 GAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTCATACTG 913 Query 126325 AAACAATGTGACGTCGAGAGTTTGGATTGGTTTT--AATTT 126363 | | |||||| | ||| || |||||| |||| ||||| Sbjct 912 ATAAAATGTGTCTTCGTGAAAAAGGATTGTTTTTTAAATTT 872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408590935290293