Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq1121 170 2e-37
>seq1121
Length=1158
Score = 170 bits (188), Expect = 2e-37
Identities = 209/281 (74%), Gaps = 7/281 (2%)
Strand=Plus/Minus
Query 126089 ATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTT 126148
||||||||| ||||| || || |||||||| ||||| || | || | |||||| ||
Sbjct 1151 ATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAGCCACATATTTG 1092
Query 126149 TGC-AACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATA 126207
||| |||| || ||| | ||| |||||| |||||||| |||||||| |||||||| |
Sbjct 1091 TGCTAACATTAT-TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTAAAAAAA 1033
Query 126208 TATCAGCACTTCTTTGATATAATTGACAATTTAA---TTTACCCTCTTGTACGTAAAATT 126264
|||| ||||| | |||||||||||||||| ||| |||| | || ||||||||||
Sbjct 1032 TATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGTAAAATT 973
Query 126265 GAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTG 126324
||| | || || || ||||||| |||||| | ||||| | |||||| ||| |||
Sbjct 972 GAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTCATACTG 913
Query 126325 AAACAATGTGACGTCGAGAGTTTGGATTGGTTTT--AATTT 126363
| | |||||| | ||| || |||||| |||| |||||
Sbjct 912 ATAAAATGTGTCTTCGTGAAAAAGGATTGTTTTTTAAATTT 872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408590935290293
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |