Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1212 114 3e-20
seq249 113 1e-19
seq107 113 1e-19
seq812 105 2e-17
seq966 100 7e-16
seq917 98.7 2e-15
seq1376 91.5 4e-13
seq20 89.7 1e-12
>seq1212
Length=36954
Score = 114 bits (126), Expect = 3e-20
Identities = 106/132 (80%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| || || ||||| ||| ||||||||||||| ||||||||||| | |
Sbjct 1896 TGGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGTCC 1837
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACGC 7854
|||||| || ||||||||||||| |||||| |||||| | |||| ||||| ||| ||||
Sbjct 1836 CCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTAGTCCCCAGGCGGAATGTTTAACGC 1777
Query 7855 GTTAGCT-TAAT 7865
||||||| ||||
Sbjct 1776 GTTAGCTGTAAT 1765
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/100 (83%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||| ||||| | |||| ||| | || ||| | |||||
Sbjct 1234 TGAGAGGATGATCAGCCACACTGGAACTGAGATACGGTCCA-GACTCCTACGGGAGGCAG 1292
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865
|||||| ||||||| |||||||||||||||| ||||| ||
Sbjct 1293 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAG 1332
>seq249
Length=9465
Score = 113 bits (124), Expect = 1e-19
Identities = 109/139 (78%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| |||| ||||| || ||||||||||||| |||||||||
Sbjct 7956 TATGTCAAGGGCTGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGC 8015
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | | | |||||| || ||||||||||||| |||||| |||| | | |||| ||
Sbjct 8016 TTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGG 8075
Query 7844 AATATTT-ACGCGTTAGCT 7861
||| ||| | |||||||||
Sbjct 8076 AATGTTTAATGCGTTAGCT 8094
Score = 98.7 bits (108), Expect = 2e-15
Identities = 92/113 (81%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 8632 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 8574
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878
|||||| ||||||| ||||||||||| |||| ||||| || ||| |||||
Sbjct 8573 CAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 8521
Score = 89.7 bits (98), Expect = 1e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || ||||||||||||||||| ||||||||||| ||| || |||| |
Sbjct 4974 GGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGC 4915
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| ||||||||||||||
Sbjct 4914 AAGACGACGTATAGGGTCTGAC 4893
>seq107
Length=12117
Score = 113 bits (124), Expect = 1e-19
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|| ||||||||||||||||| || |||||||| ||||| ||||| ||||||| ||||||
Sbjct 4949 AAAATTTGACCATCAGTAATTGAAATAACATTAGTAGGAATATATGCAGAAATATCACCG 4890
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATTT 4587
||||||||||| | || ||||||||| || | ||||||||| |||| ||||
Sbjct 4889 GCTTGTGTTTCAATAATAGGTAAGGCAGTAATACTCCCACCACCATGTTTTTCATTT 4833
>seq812
Length=1388629
Score = 105 bits (116), Expect = 2e-17
Identities = 84/97 (87%), Gaps = 3/97 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||||||||||||| | ||||||||| || ||| | |||||
Sbjct 96 TGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAAA-CTCCTACGGGAGGCAG 38
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATC 6862
|||||| ||||||| |||||||||||||||| |||||
Sbjct 37 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATC 1
>seq966
Length=90452
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 89438 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 89379
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACGC 7854
|||||| || ||||||||||||| |||||| |||| | | |||| ||||| || | ||
Sbjct 89378 CCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGAATGCTTAAAGC 89319
Query 7855 GTTAGCT 7861
|||||||
Sbjct 89318 GTTAGCT 89312
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/95 (83%), Gaps = 3/95 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGA-AAACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||||||||||||| | ||||||||| || ||| | |||||
Sbjct 88774 TGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAA-ACTCCTACGGGAGGCAG 88832
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGA 6860
|||||| |||| || |||||||||||||| |||
Sbjct 88833 CAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGA 88867
>seq917
Length=2224
Score = 98.7 bits (108), Expect = 2e-15
Identities = 92/113 (81%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAA-AGGGCAG 6825
|||||| |||| | |||||||||||||||| | ||||||||| |||||| | |||||
Sbjct 2032 TGAGAGGATGAACGGCCACATTGGGACTGAGACACGGCCCAAA-CTTCTACGGAAGGCAG 1974
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878
|||| | |||| ||| ||||||||||||||| |||| ||| |||| |||||
Sbjct 1973 CAGTAGGGAATTTTTCACAATGGGCGAAAGCCTGATGGAGCAATGCCGCGTGA 1921
Score = 91.5 bits (100), Expect = 4e-13
Identities = 97/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| || || ||||| || ||||||||||||| ||||||||||| | |
Sbjct 1349 TGGTAAGGTTTTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGTCC 1408
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| | || |||||||| ||| || || | ||
Sbjct 1409 CCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCATACTACTCAGGCGGAGTACTTAATGC 1468
Query 7855 GTTAGCT 7861
|||||||
Sbjct 1469 GTTAGCT 1475
>seq1376
Length=19117
Score = 91.5 bits (100), Expect = 4e-13
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 7545 TAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTT 7604
|||| ||| || || ||||| || ||||| | |||||| | | ||| | || ||| |
Sbjct 7943 TAATTACCAGCTATATAACGTAATGATTACAGGGCATGCGGTAATAATGGTGTTTTTTAT 7884
Query 7605 TGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGC 7664
| ||||| | | || || || || || ||||| ||||| ||| | |||||||||||
Sbjct 7883 GATAATGCCAGCCTTAATGGGAGGATTTGGTAATTGGTTCGTACCTCTCATGATTGGTGC 7824
Query 7665 TCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATT 7709
|| |||||||| ||||| | | || ||| |||||||||| ||
Sbjct 7823 ACCAGATATGGCATTTCCTCGTATGAATAATTTAAGTTTTTGGTT 7779
>seq20
Length=12842
Score = 89.7 bits (98), Expect = 1e-12
Identities = 86/109 (79%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 372598 TAAGCTGCTATAAG-CAATTACTTATAGGTGTAACAGAATAGAGGGTAGCGACTGTTTAC 372656
||| ||||| | || ||| || |||||| ||| ||||| | |||||||||||||||
Sbjct 11086 TAACCTGCTTTTAGGCAACTATGAGTAGGTGGCACAAAATAGGGAGTAGCGACTGTTTAC 11145
Query 372657 TAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATAGGGTCTGAC 372705
|||||||||||||||| || || |||| || ||||||||||||||
Sbjct 11146 TAAAAACACAGGACTCTGCAAACACGTAAGTGGAAGTATAGGGTCTGAC 11194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192508296320306
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |