Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq890 104 2e-17
seq743 93.3 3e-14
seq1482 86.0 5e-12
>seq890
Length=125401
Score = 104 bits (114), Expect = 2e-17
Identities = 181/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 29652 GTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29711
|||||| |||| || || | ||| || || || | ||| ||||| ||||| ||||| |
Sbjct 47136 GTTCCAGATGGTTCAGATACAGGTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCT 47195
Query 29712 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29771
| || || ||| || |||| ||| || || || | |||| ||||||||| || |
Sbjct 47196 CCAGACCCACGACCTGGGCCACCATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACG 47255
Query 29772 GCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGC 29831
|||| || || ||||| | | ||| || |||||||| ||| | ||||||
Sbjct 47256 GCACGCCCAGGAAGATGTCGGCGCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTG 47315
Query 29832 TCACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTG 29890
||| | ||||| ||| |||| |||||||| || ||||||||| ||| |||
Sbjct 47316 CGACGAAGAACTGGAACA-GGCAGTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCC 47374
Query 29891 GGGTTCCAGGCACACACGATG 29911
||||||||||| | ||||||
Sbjct 47375 GGGTTCCAGGCGCTGACGATG 47395
>seq743
Length=263205
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 29675 TGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29734
|| || || || || ||||||| || || ||||| | || | || || || || |||
Sbjct 72921 TGCGCGTCGCCGAGCGTGTGGATGAAATCGCCCGGCGCAAGATCCGTCACCTGTGCGATC 72980
Query 29735 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCT 29794
|| ||| || || | ||| |||||||| || ||||| ||||| || ||| |
Sbjct 72981 ATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACGGCACGCCGAGAAACACGTCGGCC 73040
Query 29795 GACCTCTGGTAGAGCTGGCACGAGAGCTCTCCG-TCGCTCACGTAAAACTGACACATGGC 29853
|| | ||| ||||||||||||||||| | ||| |||| ||||| ||||| ||| |
Sbjct 73041 GAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCGC-GACGTAGAACTGGAACAGGCA 73099
Query 29854 ATGGCACGGAGGAAGGGCCATGAGA 29878
|||||| || || || |||||| ||
Sbjct 73100 ATGGCATGGCGGCAGCGCCATGTGA 73124
>seq1482
Length=483770
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29675 TGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29734
|| || || ||||| ||||| | || || |||| || | |||||||| || || | |
Sbjct 421997 TGCGCGTCACCCAGCGTGTGAATGAATTCGCCCGCTTTCAAGCCGGTGACCTGTGCGACC 421938
Query 29735 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCT 29794
|| ||| || || | ||| |||||||| || ||||| ||||| | || |
Sbjct 421937 ATCATCGTCAGCAGCGCATAGGATGCGATGTTGAACGGCACGCCGAGGAAGACATCAGCG 421878
Query 29795 GACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCA 29854
|| | ||| |||||||||||||| || | |||| | || || |||||| ||| | |
Sbjct 421877 GAGCGCTGATAGAGCTGGCACGACAGTTTGCCGTTGGCGACATAGAACTGAAACAGGCAA 421818
Query 29855 TGGCACGGAGGAAGGGCCAT 29874
|||||||| || || |||||
Sbjct 421817 TGGCACGGGGGCAGCGCCAT 421798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406155779779114
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |