Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq890 104 2e-17 seq743 93.3 3e-14 seq1482 86.0 5e-12 >seq890 Length=125401 Score = 104 bits (114), Expect = 2e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 29652 GTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29711 |||||| |||| || || | ||| || || || | ||| ||||| ||||| ||||| | Sbjct 47136 GTTCCAGATGGTTCAGATACAGGTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCT 47195 Query 29712 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29771 | || || ||| || |||| ||| || || || | |||| ||||||||| || | Sbjct 47196 CCAGACCCACGACCTGGGCCACCATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACG 47255 Query 29772 GCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGC 29831 |||| || || ||||| | | ||| || |||||||| ||| | |||||| Sbjct 47256 GCACGCCCAGGAAGATGTCGGCGCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTG 47315 Query 29832 TCACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTG 29890 ||| | ||||| ||| |||| |||||||| || ||||||||| ||| ||| Sbjct 47316 CGACGAAGAACTGGAACA-GGCAGTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCC 47374 Query 29891 GGGTTCCAGGCACACACGATG 29911 ||||||||||| | |||||| Sbjct 47375 GGGTTCCAGGCGCTGACGATG 47395 >seq743 Length=263205 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29675 TGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29734 || || || || || ||||||| || || ||||| | || | || || || || ||| Sbjct 72921 TGCGCGTCGCCGAGCGTGTGGATGAAATCGCCCGGCGCAAGATCCGTCACCTGTGCGATC 72980 Query 29735 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCT 29794 || ||| || || | ||| |||||||| || ||||| ||||| || ||| | Sbjct 72981 ATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACGGCACGCCGAGAAACACGTCGGCC 73040 Query 29795 GACCTCTGGTAGAGCTGGCACGAGAGCTCTCCG-TCGCTCACGTAAAACTGACACATGGC 29853 || | ||| ||||||||||||||||| | ||| |||| ||||| ||||| ||| | Sbjct 73041 GAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCGC-GACGTAGAACTGGAACAGGCA 73099 Query 29854 ATGGCACGGAGGAAGGGCCATGAGA 29878 |||||| || || || |||||| || Sbjct 73100 ATGGCATGGCGGCAGCGCCATGTGA 73124 >seq1482 Length=483770 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 29675 TGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29734 || || || ||||| ||||| | || || |||| || | |||||||| || || | | Sbjct 421997 TGCGCGTCACCCAGCGTGTGAATGAATTCGCCCGCTTTCAAGCCGGTGACCTGTGCGACC 421938 Query 29735 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCT 29794 || ||| || || | ||| |||||||| || ||||| ||||| | || | Sbjct 421937 ATCATCGTCAGCAGCGCATAGGATGCGATGTTGAACGGCACGCCGAGGAAGACATCAGCG 421878 Query 29795 GACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCA 29854 || | ||| |||||||||||||| || | |||| | || || |||||| ||| | | Sbjct 421877 GAGCGCTGATAGAGCTGGCACGACAGTTTGCCGTTGGCGACATAGAACTGAAACAGGCAA 421818 Query 29855 TGGCACGGAGGAAGGGCCAT 29874 |||||||| || || ||||| Sbjct 421817 TGGCACGGGGGCAGCGCCAT 421798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406155779779114