Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq712 462 1e-125 seq752 114 8e-21 seq998 84.2 1e-11 >seq712 Length=321952 Score = 462 bits (512), Expect = 1e-125 Identities = 644/900 (72%), Gaps = 2/900 (0%) Strand=Plus/Minus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 || ||| | || || |||||||| |||||| |||| || ||||| ||| | || ||||| Sbjct 143926 GTCTGGAACCGTCTGACCGGCAATTTCTGGCTGCCGGAAAAGGTGCCGCTTTCGAACGAT 143867 Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382 || | || ||||| || || | ||| | || ||| |||| || || || || |||||| Sbjct 143866 ATTCAGTCGTGGGAAACGCTGAAACCGCAGGAAAAGCAACTGACGATCCGCGTTTTCACC 143807 Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442 || || || || ||||| || |||||| | |||| || ||| | ||| || | || Sbjct 143806 GGGCTGACACTTCTCGATACGATCCAGAACGCAGTCGGTGCCGTGAAGCTGATGGATGAT 143747 Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502 || || ||||| || || |||||||| |||||||| | |||||||| |||| || Sbjct 143746 GCAGCGACGCCGCATGAAGAAGCGGTGCTGTCCAACATCTCCTTCATGGAAGCGGTTCAT 143687 Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCG 78562 || ||||| ||||| ||||| || | ||| | | | ||||||| || Sbjct 143686 GCACGATCCTATTCGTCGATATTCTCGACTTTGTGCCTGACGCCGGATGTTGACGATGCC 143627 Query 78563 TTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTAC 78622 | |||||||| ||||| ||||| | ||||||||||||| || | |||||||| | Sbjct 143626 TATCGTTGGTCCGAGGAAAACGAATTCCTGCAGCGCAAGTCCGTTCTGATCCTGGACCAG 143567 Query 78623 TACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTC 78682 || |||| || || || |||| |||| | ||||| |||||||| |||| || Sbjct 143566 TATCGCGCGGATGATCCGCTGAAAAGGAAAATCGCCAGCGTTTTCCTGGAGAGCTTTCTG 143507 Query 78683 TTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACC 78742 ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| || || Sbjct 143506 TTCTATTCCGGCTTCTATCTGCCCATGTACTGGTCGAGCCGGGCAAAGCTGACCAATACA 143447 Query 78743 GCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATAC 78802 || || | |||||| | || ||||| || || || || ||||| || |||||||| ||| Sbjct 143446 GCCGATCTTATCCGGCTCATCATCCGTGATGAGGCTGTGCATGGCTATTACATCGGTTAC 143387 Query 78803 AAGTACCAGCGAGGCCTCGAGACCCAGGGGC-CGGCGCGGCAGGCTGAGCTCAAGGAGTA 78861 || | |||||| || || || || | | | | || | || | ||||||| | Sbjct 143386 AAATTCCAGCGCGGACTGGA-ACGCTTGAACGAAGAGCAGAAGCAGGCAATCAAGGATTT 143328 Query 78862 CACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTGACTACACCGAGCAGCTCTA 78921 | ||||| || || ||| || |||||||| ||| | |||||| || ||| || Sbjct 143327 TGCCTTCGAACTTCTTCTGGAACTTTACGACAATGAGGTTCGCTACACGGAAGCGCTATA 143268 Query 78922 TGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGC 78981 ||| | ||| || || || || || |||||||| ||||||| ||||||| ||||||||| Sbjct 143267 TGATGGCGTTGGCCTAACTGAAGACGTCAAGAAATTCCTGCATTACAACGCCAACAAGGC 143208 Query 78982 GCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAGACCCGGC 79041 || |||||||||||||| || ||||| ||||| |||| | || || ||||||| Sbjct 143207 TCTCATGAACCTCGGCTATGAGGCACTCTTCCCGGCTGAAGCGTGCAAGGTCAACCCGGC 143148 Query 79042 CATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGG 79101 ||| ||||||| || || || | ||||| ||||||||||| |||||||| || || Sbjct 143147 GATCCTGTCCGCTCTTTCGCCGAATGCAGACGAAAACCACGACTTTTTCTCCGGTTCCGG 143088 Query 79102 CTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGATG 79161 ||| |||||||||||||| || | || || | ||||| |||||| |||||||| Sbjct 143087 CTCTTCTTACGTCATCGGCAAGGCGGTCGCGACTGAGGATGAAGACTGGAGTTTCTGATG 143028 >seq752 Length=262051 Score = 114 bits (126), Expect = 8e-21 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 45292 CGCTGCCGTTCATCCATCCGCACGTGGCGCTGATGCCGGATGCTCACAGCGGCAAGGGGT 45351 ||||||||||||||||| || || ||| | ||||| || | ||| | |||| |||| Sbjct 251555 CGCTGCCGTTCATCCATAAACATGTCGCGGTCATGCCCGACGTGCACTGGGGCATGGGGG 251614 Query 45352 CCGCGGTCGGCACTGTGATCCCGACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCGTCG 45411 | |||| || | |||||||||||||| | ||| | || ||||| || || ||||| | Sbjct 251615 CGACGGTGGGTTCCGTGATCCCGACCGTGGGGGCGATCATTCCCGCCGCCGTGGGCGTGG 251674 Query 45412 ACATCGGCTGCGGCATGATCGGCGTGCAGAC 45442 ||||||||||||||||||| | |||| ||| Sbjct 251675 ACATCGGCTGCGGCATGATGGCGGTGCGGAC 251705 >seq998 Length=1052685 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 4260 TATGGGCGTAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGGT-GTAGGTTCGAG 4318 || ||| |||||||| |||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 267576 TAGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAG 267635 Query 4319 TCCTGCCGCCTGTGCGAG 4336 |||||||||| ||| || Sbjct 267636 TCCTGCCGCCCCTGCCAG 267653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299316131674982