Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq712 462 1e-125
seq752 114 8e-21
seq998 84.2 1e-11
>seq712
Length=321952
Score = 462 bits (512), Expect = 1e-125
Identities = 644/900 (72%), Gaps = 2/900 (0%)
Strand=Plus/Minus
Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322
|| ||| | || || |||||||| |||||| |||| || ||||| ||| | || |||||
Sbjct 143926 GTCTGGAACCGTCTGACCGGCAATTTCTGGCTGCCGGAAAAGGTGCCGCTTTCGAACGAT 143867
Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382
|| | || ||||| || || | ||| | || ||| |||| || || || || ||||||
Sbjct 143866 ATTCAGTCGTGGGAAACGCTGAAACCGCAGGAAAAGCAACTGACGATCCGCGTTTTCACC 143807
Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442
|| || || || ||||| || |||||| | |||| || ||| | ||| || | ||
Sbjct 143806 GGGCTGACACTTCTCGATACGATCCAGAACGCAGTCGGTGCCGTGAAGCTGATGGATGAT 143747
Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502
|| || ||||| || || |||||||| |||||||| | |||||||| |||| ||
Sbjct 143746 GCAGCGACGCCGCATGAAGAAGCGGTGCTGTCCAACATCTCCTTCATGGAAGCGGTTCAT 143687
Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCG 78562
|| ||||| ||||| ||||| || | ||| | | | ||||||| ||
Sbjct 143686 GCACGATCCTATTCGTCGATATTCTCGACTTTGTGCCTGACGCCGGATGTTGACGATGCC 143627
Query 78563 TTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTAC 78622
| |||||||| ||||| ||||| | ||||||||||||| || | |||||||| |
Sbjct 143626 TATCGTTGGTCCGAGGAAAACGAATTCCTGCAGCGCAAGTCCGTTCTGATCCTGGACCAG 143567
Query 78623 TACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTC 78682
|| |||| || || || |||| |||| | ||||| |||||||| |||| ||
Sbjct 143566 TATCGCGCGGATGATCCGCTGAAAAGGAAAATCGCCAGCGTTTTCCTGGAGAGCTTTCTG 143507
Query 78683 TTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACC 78742
||||| || |||||||| ||||| ||||||||||||||||| || |||||||| || ||
Sbjct 143506 TTCTATTCCGGCTTCTATCTGCCCATGTACTGGTCGAGCCGGGCAAAGCTGACCAATACA 143447
Query 78743 GCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATAC 78802
|| || | |||||| | || ||||| || || || || ||||| || |||||||| |||
Sbjct 143446 GCCGATCTTATCCGGCTCATCATCCGTGATGAGGCTGTGCATGGCTATTACATCGGTTAC 143387
Query 78803 AAGTACCAGCGAGGCCTCGAGACCCAGGGGC-CGGCGCGGCAGGCTGAGCTCAAGGAGTA 78861
|| | |||||| || || || || | | | | || | || | ||||||| |
Sbjct 143386 AAATTCCAGCGCGGACTGGA-ACGCTTGAACGAAGAGCAGAAGCAGGCAATCAAGGATTT 143328
Query 78862 CACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTGACTACACCGAGCAGCTCTA 78921
| ||||| || || ||| || |||||||| ||| | |||||| || ||| ||
Sbjct 143327 TGCCTTCGAACTTCTTCTGGAACTTTACGACAATGAGGTTCGCTACACGGAAGCGCTATA 143268
Query 78922 TGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGC 78981
||| | ||| || || || || || |||||||| ||||||| ||||||| |||||||||
Sbjct 143267 TGATGGCGTTGGCCTAACTGAAGACGTCAAGAAATTCCTGCATTACAACGCCAACAAGGC 143208
Query 78982 GCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAGACCCGGC 79041
|| |||||||||||||| || ||||| ||||| |||| | || || |||||||
Sbjct 143207 TCTCATGAACCTCGGCTATGAGGCACTCTTCCCGGCTGAAGCGTGCAAGGTCAACCCGGC 143148
Query 79042 CATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGG 79101
||| ||||||| || || || | ||||| ||||||||||| |||||||| || ||
Sbjct 143147 GATCCTGTCCGCTCTTTCGCCGAATGCAGACGAAAACCACGACTTTTTCTCCGGTTCCGG 143088
Query 79102 CTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGATG 79161
||| |||||||||||||| || | || || | ||||| |||||| ||||||||
Sbjct 143087 CTCTTCTTACGTCATCGGCAAGGCGGTCGCGACTGAGGATGAAGACTGGAGTTTCTGATG 143028
>seq752
Length=262051
Score = 114 bits (126), Expect = 8e-21
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 45292 CGCTGCCGTTCATCCATCCGCACGTGGCGCTGATGCCGGATGCTCACAGCGGCAAGGGGT 45351
||||||||||||||||| || || ||| | ||||| || | ||| | |||| ||||
Sbjct 251555 CGCTGCCGTTCATCCATAAACATGTCGCGGTCATGCCCGACGTGCACTGGGGCATGGGGG 251614
Query 45352 CCGCGGTCGGCACTGTGATCCCGACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCGTCG 45411
| |||| || | |||||||||||||| | ||| | || ||||| || || ||||| |
Sbjct 251615 CGACGGTGGGTTCCGTGATCCCGACCGTGGGGGCGATCATTCCCGCCGCCGTGGGCGTGG 251674
Query 45412 ACATCGGCTGCGGCATGATCGGCGTGCAGAC 45442
||||||||||||||||||| | |||| |||
Sbjct 251675 ACATCGGCTGCGGCATGATGGCGGTGCGGAC 251705
>seq998
Length=1052685
Score = 84.2 bits (92), Expect = 1e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 4260 TATGGGCGTAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGGT-GTAGGTTCGAG 4318
|| ||| |||||||| |||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 267576 TAGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAG 267635
Query 4319 TCCTGCCGCCTGTGCGAG 4336
|||||||||| ||| ||
Sbjct 267636 TCCTGCCGCCCCTGCCAG 267653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299316131674982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |