Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq1095 152 2e-32 >seq1095 Length=1089284 Score = 152 bits (168), Expect = 2e-32 Identities = 375/564 (66%), Gaps = 6/564 (1%) Strand=Plus/Plus Query 8028 GATTGAACTTCCGCCAAAGCTGATACCAGTCTTCTCAGGCCCTGCCCGGTACCGCGGCGC 8087 ||||||||| || | ||||| || || || || | || || ||| || || || Sbjct 164588 GATTGAACTGCCTCAGAAGCTAATTCCGGTGTTTACCGGAGAGGCGATGTATCGAGGGGC 164647 Query 8088 CCATGGTGGACGAGGCAGTGCCAAAACGCGCACGTTCGCCAAGATGACGGCAGTAAGGGC 8147 | || || || || |||||| ||||| | || ||||||||| |||| || ||| Sbjct 164648 TTACGGCGGTCGTGGTTCTGCCAAGACGCGATCATTTGCCAAGATGGCGGCGGTTTGGGG 164707 Query 8148 GTACATGTACGCGGAGGCTGGAATCAGT--GGCGTGATCCTCGGGGCGCGCGAGTACATG 8205 || | |||| | || ||| || |||||||| || | | || || |||||| Sbjct 164708 GTTGCGTTTCGCGCAAGCC--AATGAGCCGGGCGTGATTGTCTGCGGCCGAGAATACATG 164765 Query 8206 AACTCGCTTGAAGAGTCCTCCATGGAGGAAATCAAGCAGGCAATTCGATCCGAGCCATGG 8265 |||||||| || ||| || |||| || ||||| || ||| || ||||| ||| Sbjct 164766 AACTCGCTGGATGAGAGTTCGATGGCTGAGGTCAAGGCCGCGATTGCCTCTGAGCCGTGG 164825 Query 8266 CTGGACGCGTACTTTGACATTGGTGAGAAGTACATTCGGACCAAGAATCGCCGAATTTCG 8325 ||| ||| || ||| |||| ||||||||||| |||| | |||| || | Sbjct 164826 CTGTCGGCGGCCTATGATGTTGGCGAGAAGTACATCAGGACGGCGGATCGTCGGGTCGAT 164885 Query 8326 TATGTGTTCTGCGGATTGCGCCATAACCTCGACAGCATCAAGTCGAAGGCCAGAATCCTG 8385 | || ||| || |||| |||||||| ||||| ||||| |||||| | | || | | Sbjct 164886 TTTGCGTTTATTGGGCTGCGGCATAACCTGGACAGTATCAAATCGAAGTCTCGTATTCGG 164945 Query 8386 ATCGCCTGGGTTGACGAGGCTGAAAACGTCAGCGAAACGGCGTGGAT-AAAGCTCCTGCC 8444 | |||||||| || || || || ||| |||||||||| ||||| | || Sbjct 164946 CTGTTGTGGGTTGATGAAGCGGAGCCGGTGTCGGAATCGGCGTGGATGAAAGCGA-TCCC 165004 Query 8445 GACGGTTCGTGAGAACGACTCGGAGGTCTGGATTACCTGGAACCCGGAGCGCGATGGAAG 8504 ||| || || ||| | | || ||| | ||| | || ||||| || |||||| | || Sbjct 165005 GACAGTCCGCGAGGATGGGTCTGAGATTTGGGTGACGTGGAATCCAGAGCGCAAGAACAG 165064 Query 8505 CGCCACCGACACCCGGTTCCGGAAGAACATGCCGGCAGGCGCAAAAATCGTCGAGATGAA 8564 ||| ||| ||| ||||| || ||| | ||| | | | | || |||||||| |||| Sbjct 165065 CGCGACCCACAAGCGGTTTCGTGAGAGCCCGCCCGAAAGTTCGAAGATCGTCGAATTGAA 165124 Query 8565 CTACACGGACAATCCGTGGTTTCC 8588 || || |||||||||||||| Sbjct 165125 CTGGCGAGATAATCCGTGGTTTCC 165148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156781209146810