Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_030929.1
Length=49033
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 152 2e-32
>seq1095
Length=1089284
Score = 152 bits (168), Expect = 2e-32
Identities = 375/564 (66%), Gaps = 6/564 (1%)
Strand=Plus/Plus
Query 8028 GATTGAACTTCCGCCAAAGCTGATACCAGTCTTCTCAGGCCCTGCCCGGTACCGCGGCGC 8087
||||||||| || | ||||| || || || || | || || ||| || || ||
Sbjct 164588 GATTGAACTGCCTCAGAAGCTAATTCCGGTGTTTACCGGAGAGGCGATGTATCGAGGGGC 164647
Query 8088 CCATGGTGGACGAGGCAGTGCCAAAACGCGCACGTTCGCCAAGATGACGGCAGTAAGGGC 8147
| || || || || |||||| ||||| | || ||||||||| |||| || |||
Sbjct 164648 TTACGGCGGTCGTGGTTCTGCCAAGACGCGATCATTTGCCAAGATGGCGGCGGTTTGGGG 164707
Query 8148 GTACATGTACGCGGAGGCTGGAATCAGT--GGCGTGATCCTCGGGGCGCGCGAGTACATG 8205
|| | |||| | || ||| || |||||||| || | | || || ||||||
Sbjct 164708 GTTGCGTTTCGCGCAAGCC--AATGAGCCGGGCGTGATTGTCTGCGGCCGAGAATACATG 164765
Query 8206 AACTCGCTTGAAGAGTCCTCCATGGAGGAAATCAAGCAGGCAATTCGATCCGAGCCATGG 8265
|||||||| || ||| || |||| || ||||| || ||| || ||||| |||
Sbjct 164766 AACTCGCTGGATGAGAGTTCGATGGCTGAGGTCAAGGCCGCGATTGCCTCTGAGCCGTGG 164825
Query 8266 CTGGACGCGTACTTTGACATTGGTGAGAAGTACATTCGGACCAAGAATCGCCGAATTTCG 8325
||| ||| || ||| |||| ||||||||||| |||| | |||| || |
Sbjct 164826 CTGTCGGCGGCCTATGATGTTGGCGAGAAGTACATCAGGACGGCGGATCGTCGGGTCGAT 164885
Query 8326 TATGTGTTCTGCGGATTGCGCCATAACCTCGACAGCATCAAGTCGAAGGCCAGAATCCTG 8385
| || ||| || |||| |||||||| ||||| ||||| |||||| | | || | |
Sbjct 164886 TTTGCGTTTATTGGGCTGCGGCATAACCTGGACAGTATCAAATCGAAGTCTCGTATTCGG 164945
Query 8386 ATCGCCTGGGTTGACGAGGCTGAAAACGTCAGCGAAACGGCGTGGAT-AAAGCTCCTGCC 8444
| |||||||| || || || || ||| |||||||||| ||||| | ||
Sbjct 164946 CTGTTGTGGGTTGATGAAGCGGAGCCGGTGTCGGAATCGGCGTGGATGAAAGCGA-TCCC 165004
Query 8445 GACGGTTCGTGAGAACGACTCGGAGGTCTGGATTACCTGGAACCCGGAGCGCGATGGAAG 8504
||| || || ||| | | || ||| | ||| | || ||||| || |||||| | ||
Sbjct 165005 GACAGTCCGCGAGGATGGGTCTGAGATTTGGGTGACGTGGAATCCAGAGCGCAAGAACAG 165064
Query 8505 CGCCACCGACACCCGGTTCCGGAAGAACATGCCGGCAGGCGCAAAAATCGTCGAGATGAA 8564
||| ||| ||| ||||| || ||| | ||| | | | | || |||||||| ||||
Sbjct 165065 CGCGACCCACAAGCGGTTTCGTGAGAGCCCGCCCGAAAGTTCGAAGATCGTCGAATTGAA 165124
Query 8565 CTACACGGACAATCCGTGGTTTCC 8588
|| || ||||||||||||||
Sbjct 165125 CTGGCGAGATAATCCGTGGTTTCC 165148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156781209146810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |