Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq97 158 3e-34 seq743 125 2e-24 >seq97 Length=479585 Score = 158 bits (174), Expect = 3e-34 Identities = 342/505 (68%), Gaps = 20/505 (4%) Strand=Plus/Minus Query 27154 TATGTCGAAGAGCAGGAGATCCTGTTCGGCGATGGCACCGGCGCGCACCTCGACGGCATC 27213 |||||||||||| | || | || ||||||||||||||| | |||| ||||||| Sbjct 247635 TATGTCGAAGAGAACCAGCTTCTCAATGGCGATGGCACCGGCCAGAACCTGCTCGGCATC 247576 Query 27214 GTGCCGCAAGCCTCTGCGTT--CAGCGCCGCCTT-CGCGGTCGAGCAG--CA----GAAC 27264 | ||||| || | || || ||| ||| || | || | || || || | Sbjct 247575 ATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCCCGCCACTGTGACC 247516 Query 27265 GGTATCGATGACCTGCGCCTGGCGATGCTGCAGGCCCAGCTGGCGCGCCTGCCGGCATCC 27324 ||||| || ||| || |||||||||| |||||| ||||| |||||| | Sbjct 247515 GGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGAATATCCGGCAACG 247456 Query 27325 GGCCACGTTCTGCACTTCATCGACTGGGCGAAGATCGAGCTGACCAAGGACACCCTGGGC 27384 || ||||| || | || |||||| | |||||| || |||||||||| |||| Sbjct 247455 GGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAGGACACCCAGGGC 247396 Query 27385 CGCTACATCCTCGCCAACCCGCTGGGCCTGGCCGGCCCGCTGCTGTGGGGCCTGCCGGTG 27444 || |||||| ||| |||||||| ||| | | ||| || ||||| |||||||| Sbjct 247395 CGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGGGGTCTGCCGGTT 247336 Query 27445 GTTGCCACTGAA---ATCGCCGCGTTCCAGGGCAAGTTCCTGACTGGTGCGTTCCAGACC 27501 || | || | || ||||| ||||||||||| || ||||| ||| || Sbjct 247335 GTCACGACCCAGGCCATGGCCGCA------GGCAAGTTCCTCACCGGTGCATTCAAGCTG 247282 Query 27502 GGCGCGCAGATCTTCGATCGCGAAGACGCCAACGTGGTGATCTCCACCGAGAACGCCGAC 27561 || |||||||| ||||| ||| | || ||| | || | |||||||||| ||| Sbjct 247281 GGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAACGAAGAC 247222 Query 27562 GACTTCGAGAAGAACATGATCTCGATCCGTTGC-GAAGAGCGCCTGGCGCTGGCCGTGAA 27620 |||||| |||||| | || | |||| | || |||||||| || || |||||||| | Sbjct 247221 GACTTCATCAAGAACCTCGTCACCATCC-TCGCAGAAGAGCGTCTTGCTCTGGCCGTCTA 247163 Query 27621 GCGCCCCGAGGCGTTCATCTACGGC 27645 || || || ||||||||||||||| Sbjct 247162 TCGTCCAGAAGCGTTCATCTACGGC 247138 >seq743 Length=263205 Score = 125 bits (138), Expect = 2e-24 Identities = 341/514 (66%), Gaps = 21/514 (4%) Strand=Plus/Minus Query 27141 CTTCGGCCTGAAGTATGTCGAAGAGCAGGAGATCCTGTTCGGCGATGGCACCGGCGCGCA 27200 || ||||||||||| || || || || | ||| |||| | ||||| || | | Sbjct 16062 CTACGGCCTGAAGTTCGTTGAGGAAACTCAGCTTCTGACCGGCAACGGCACTGGTCAGAA 16003 Query 27201 CCTCGACGGCATCGTGCCGCAAGCCTCTGCGTTCAGCGCCGCCTT----CGCGGTCGAGC 27256 ||| |||| || |||||||| || ||||| || |||||| | | ||||| || Sbjct 16002 CCTGAACGGTATTGTGCCGCAGGCTTCTGC-TTATGCGCCGTCATTCAACGCGGCTGACG 15944 Query 27257 AGCAGAACGGTATCGATGACCTGCGCCTGGCGATGCTGCAGGCCCAGCTGGCGCGCCTGC 27316 | ||| | ||||||| ||| ||||| || || |||||| |||||| | Sbjct 15943 AACAG---GCTATCGATCGCCTTCGCCTCGCCCTGTTGCAGGTTATCCTGGCGAATTATC 15887 Query 27317 CGGCATCCGGCCACGTTCTGCACTTCATCGACTGGGCGAAGATCGAGCTGACCAAGGACA 27376 |||| || | |||||| || | || ||||| || || ||||||||||| | Sbjct 15886 CGGCGTCGGCTTTCGTTCTCAACCCGGTTGATTGGGCACGCATTGAACTGACCAAGGATA 15827 Query 27377 CCCTGGGCCGCTACATCCTCGCCAAC-CCGCTGGGCCTGGCCGGCCCGCTGCTGTGGGGC 27435 | | ||| ||||| ||| | | |||| |||| || | |||||| ||| ||| Sbjct 15826 CTCAGGGTCGCTATATCGTTGGCAACGCCGCGTCTCC-GATTGGCCCGTCGCTCTGGAAT 15768 Query 27436 CTGCCGGTGGTTGCCACTGAAATCGCCG-CGTTC-CAG--GGCAAGTTCCTGACTGGTGC 27491 || |||||||| | | |||| | || | | | ||| |||||||||| || || Sbjct 15767 CTCCCGGTGGTGG-------AGTCGCAGGCGATGACCGCCGGCGAGTTCCTGACGGGCGC 15715 Query 27492 GTTCCAGACCGGCGCGCAGATCTTCGATCGCGAAGACGCCAACGTGGTGATCTCCACCGA 27551 |||| | ||| |||||| | ||||||||| | | | || | | || ||||| Sbjct 15714 GTTCAATCTCGGTGCGCAGGTATTCGATCGCATGGGTGTTGAGGTTCTTCTGTCGACCGA 15655 Query 27552 GAACGCCGACGACTTCGAGAAGAACATGATCTCGATCCGTTGCGAAGAGCGCCTGGCGCT 27611 ||| | |||||||| |||||||||||| | | ||||| ||||||||| | || | Sbjct 15654 AAACTCGGACGACTTTGAGAAGAACATGTGCACCATCCGAGTGGAAGAGCGCATTGCCTT 15595 Query 27612 GGCCGTGAAGCGCCCCGAGGCGTTCATCTACGGC 27645 ||| ||| | ||||||||| ||| | |||||| Sbjct 15594 GGCGGTGTATCGCCCCGAGAGCTTCGTTTACGGC 15561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133863217108654