Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq743 114 2e-20 seq890 95.1 2e-14 >seq743 Length=263205 Score = 114 bits (126), Expect = 2e-20 Identities = 191/273 (70%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 99180 TGAGCGAAGGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGC 99239 ||||||| |||| | |||| ||||| || || || ||||| ||||| | ||||| | Sbjct 73506 TGAGCGACGGCGCACAGAAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTC 73447 Query 99240 ACCAGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCA- 99297 | |||||||| ||||| || | || |||||| || ||||| || |||| | Sbjct 73446 ATCAGATGCGCTTCAACCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGT 73387 Query 99298 -CATGCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAAT 99356 || | ||||| | ||||||||||||||||| || ||||| ||||| || | Sbjct 73386 TCAAGG---CGATTGTCCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCT 73330 Query 99357 ATTTAAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCG 99416 || | | |||||||||| || || |||||||| ||| | || | || || || | Sbjct 73329 ATCTGCAGAATAATGGTGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTG 73270 Query 99417 GACCGGTATACGGTAAACAGTGGCGGTCTTGGC 99449 | ||||| ||||| || |||||||| || |||| Sbjct 73269 GTCCGGTCTACGGCAAGCAGTGGCGCTCATGGC 73237 >seq890 Length=125401 Score = 95.1 bits (104), Expect = 2e-14 Identities = 173/249 (69%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTG--C 99260 ||||| || || ||||| |||||| | ||||| | |||||| || || ||||| | Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662 Query 99261 AAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCACGAA 99319 ||| ||||| || | | || || ||| |||| ||| |||||||||| || |||| Sbjct 47661 AAG--GGCTTCCCCGTCCTGACCACCAAGAAGCTG-CACCTGCGTTCGATCATCATCGAA 47605 Query 99320 CTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACT 99379 ||||||||||||||| ||||| ||||| || | | || || || || || Sbjct 47604 CTGCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGC 47545 Query 99380 ATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGG 99439 || ||||| |||||| || || ||||| || || || || || || || |||||| Sbjct 47544 ATCTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGG 47485 Query 99440 CGGTCTTGG 99448 || || ||| Sbjct 47484 CGCTCGTGG 47476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716450575255800