Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq743 114 2e-20
seq890 95.1 2e-14
>seq743
Length=263205
Score = 114 bits (126), Expect = 2e-20
Identities = 191/273 (70%), Gaps = 6/273 (2%)
Strand=Plus/Minus
Query 99180 TGAGCGAAGGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGC 99239
||||||| |||| | |||| ||||| || || || ||||| ||||| | ||||| |
Sbjct 73506 TGAGCGACGGCGCACAGAAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTC 73447
Query 99240 ACCAGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCA- 99297
| |||||||| ||||| || | || |||||| || ||||| || |||| |
Sbjct 73446 ATCAGATGCGCTTCAACCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGT 73387
Query 99298 -CATGCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAAT 99356
|| | ||||| | ||||||||||||||||| || ||||| ||||| || |
Sbjct 73386 TCAAGG---CGATTGTCCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCT 73330
Query 99357 ATTTAAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCG 99416
|| | | |||||||||| || || |||||||| ||| | || | || || || |
Sbjct 73329 ATCTGCAGAATAATGGTGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTG 73270
Query 99417 GACCGGTATACGGTAAACAGTGGCGGTCTTGGC 99449
| ||||| ||||| || |||||||| || ||||
Sbjct 73269 GTCCGGTCTACGGCAAGCAGTGGCGCTCATGGC 73237
>seq890
Length=125401
Score = 95.1 bits (104), Expect = 2e-14
Identities = 173/249 (69%), Gaps = 6/249 (2%)
Strand=Plus/Minus
Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTG--C 99260
||||| || || ||||| |||||| | ||||| | |||||| || || ||||| |
Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662
Query 99261 AAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCACGAA 99319
||| ||||| || | | || || ||| |||| ||| |||||||||| || ||||
Sbjct 47661 AAG--GGCTTCCCCGTCCTGACCACCAAGAAGCTG-CACCTGCGTTCGATCATCATCGAA 47605
Query 99320 CTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACT 99379
||||||||||||||| ||||| ||||| || | | || || || || ||
Sbjct 47604 CTGCTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGC 47545
Query 99380 ATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGG 99439
|| ||||| |||||| || || ||||| || || || || || || || ||||||
Sbjct 47544 ATCTGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGG 47485
Query 99440 CGGTCTTGG 99448
|| || |||
Sbjct 47484 CGCTCGTGG 47476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716450575255800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |