Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq890 134 2e-26
seq1482 120 5e-22
seq827 93.3 7e-14
seq743 91.5 2e-13
seq910 86.0 1e-11
seq998 84.2 3e-11
>seq890
Length=125401
Score = 134 bits (148), Expect = 2e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
||||| |||||||||||||| | | | ||||| |||||| || ||||| ||| ||
Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
| |||||||| | ||||||| || ||| | ||||| ||||| ||||| ||| |||
Sbjct 47661 AAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACTG 47602
Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728
|||||||||||| || || ||||||||| | | || || || ||||| ||| |||
Sbjct 47601 CTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCATC 47542
Query 202729 TGGGACGAATGGGC 202742
||||| ||||||||
Sbjct 47541 TGGGATGAATGGGC 47528
Score = 96.9 bits (106), Expect = 5e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 203296 TGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCG 203355
|| ||| |||||||||| |||||||| ||||| | ||||||||||| |||||||||||
Sbjct 47298 TGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCC 47239
Query 203356 TATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTC 203415
|| || | ||||| |||||| || ||| || ||| | | | |||||||||
Sbjct 47238 TACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGTC 47179
Query 203416 TGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTGCAGTTA 203475
|| ||| || | || |||||| ||||||||||| |||||| || ||| |
Sbjct 47178 CATACCTTCGGCGACGCCCACCTGTATCTGAACCATCTGGAACAGGCCGAACTTCAGCTG 47119
Query 203476 ACTCGTGACCC 203486
|| || || ||
Sbjct 47118 ACGCGCGAGCC 47108
>seq1482
Length=483770
Score = 120 bits (132), Expect = 5e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 202540 GAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTT 202599
|| ||| | ||||| ||||||||||| |||| || ||||||| |||| |||
Sbjct 421426 GAGAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCAC 421485
Query 202600 GACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATT 202659
| || ||| ||| ||||| ||| | || ||||| ||| | |||| || ||| |
Sbjct 421486 AATTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCGTC 421545
Query 202660 CACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGG 202719
|| |||||||| ||||| ||||| || ||||||||||||| ||||| || || ||||
Sbjct 421546 CATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGC 421605
Query 202720 GTCACTATCTGGGACGAATGGGCG 202743
||| | |||||||| || ||||||
Sbjct 421606 GTCTCGATCTGGGATGAGTGGGCG 421629
Score = 104 bits (114), Expect = 4e-17
Identities = 154/215 (72%), Gaps = 10/215 (5%)
Strand=Plus/Plus
Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349
|| ||||| ||| | ||||||||| ||| ||||||||| | ||||||||||| ||||||
Sbjct 421852 CTGTCGTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCCGTTCAACATC 421911
Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCA---ACATGGTGGCCGAG 203406
|| || ||||| | ||||| |||||| || ||||||| | || || |
Sbjct 421912 GCATCCTATGCGCTGCTGACGATGATGGTCGC---ACAGGTCACCGGCTTGAAAGCGGGC 421968
Query 203407 GAGTTCGTCTGGACAGGC--GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCC 203464
|| ||| | ||| || ||||| | ||||| |||||||| |||||||| ||||| |
Sbjct 421969 GAATTC--ATTCACACGCTGGGTGACGCGCATCTTTATTCCAATCATCTGGAACAGGCGC 422026
Query 203465 GTCTGCAGTTAACTCGTGACCCGCACCCATTACCG 203499
| |||| || || || | |||| | |||| |||
Sbjct 422027 GATTGCAATTGACGCGCGCGCCGCGCGCATTGCCG 422061
>seq827
Length=173386
Score = 93.3 bits (102), Expect = 7e-14
Identities = 81/98 (83%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769
|||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct 17879 TGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 17820
Query 2770 TCAGTCCTGCCA-TATCTGGAG-AATTGGATGAGTGGC 2805
||| || |||| | ||| || ||| | | |||||||
Sbjct 17819 TCACTCGCGCCACTCTCTCTAGAAATAGAAAGAGTGGC 17782
Score = 89.7 bits (98), Expect = 8e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769
|||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct 17721 TGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 17662
Query 2770 TCAGTCCTGCCA 2781
||| || ||||
Sbjct 17661 TCACTCGCGCCA 17650
>seq743
Length=263205
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/185 (72%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349
|| ||||| ||| | |||||||| ||||| || || | ||||||||||| ||||||
Sbjct 73066 CTCTCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATC 73007
Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCA-ACATGGTG-GCCGAG- 203406
|| || ||||| | ||||| |||| | || ||||| | || || |||| |
Sbjct 73006 GCGTCCTATGCGCTGCTGACGATGATGATCGC---ACAGGTGACGGATCTTGCGCCGGGC 72950
Query 203407 GAGTTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGT 203466
|| ||| || || ||| || | ||||||||||||||||||||||||||||| ||
Sbjct 72949 GATTTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCGC 72890
Query 203467 CTGCA 203471
|||||
Sbjct 72889 CTGCA 72885
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
||||| |||||||| || |||| || ||||||| |||||||| || |||| ||
Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
| || || || || ||| || |||||| | | || | || | ||||| |||
Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGGCGATTGTCCACGAACTG 73364
Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728
|||||||| || || ||||||||| | | || ||| | |||| || ||||| |||
Sbjct 73363 CTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCATC 73304
Query 202729 TGGGACGAATGGGCG 202743
|||||||| ||||||
Sbjct 73303 TGGGACGAGTGGGCG 73289
>seq910
Length=120163
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2711 GTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCGT 2770
||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||
Sbjct 47985 GTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCGT 48044
Query 2771 CAGTCCTGCCAT 2782
| || |||||
Sbjct 48045 CTCTCGCGCCAT 48056
>seq998
Length=1052685
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 2711 GTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCGT 2770
||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||
Sbjct 499808 GTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCGT 499867
Query 2771 C 2771
|
Sbjct 499868 C 499868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788305228854000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |