Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031039.1
Length=251042
Score E
Sequences producing significant alignments: (Bits) Value
seq522 113 7e-20
>seq522
Length=6543
Score = 113 bits (124), Expect = 7e-20
Identities = 251/371 (68%), Gaps = 8/371 (2%)
Strand=Plus/Plus
Query 17395 AAATCAATATAGTGATGAATCAATTGATCTTTTGGAAGGTTTAGAAGGTATCAGAACACG 17454
|||| | |||| || | | |||||| | |||| ||||| |||||| | |||| |||
Sbjct 2145 AAATGATTATAATGCTAACTCAATTCAAGTTTTAGAAGGACTAGAAGCAGTTAGAAAACG 2204
Query 17455 TTTTGATATGTATGTGGGTGGAAAAG-ATTCAGCGGCATTTCATC---TTGTAAAAGAAG 17510
|| |||||| | ||| | | | || || ||| |||| | || ||||
Sbjct 2205 ACCTGGAATGTATATTGGTTCCATTGCAGAAAGAGG-ATTACATCACTTAGTTTGAGAAA 2263
Query 17511 TAGTGGACAACTCTATTGATGAAGCGATCAATGGATATTGTACTAATATTAATATTACAT 17570
|||| || || || ||||||||| || || | |||||| || ||| | | || |
Sbjct 2264 TAGTTGATAATGCTGTTGATGAAGTTATTGCCGGTTTTTGTACAAAAATTTCTGTAAC-T 2322
Query 17571 ATGATGAAAAACTCAATCAAATTTCAATTGAAGATAATGGTCGTGGTCTTCCTACTGGTA 17630
|| | ||||| ||| |||| | | | ||||||||||||| ||| ||||||||| ||
Sbjct 2323 ATTACTAAAAAT--AATGAAATATTAGTAAAAGATAATGGTCGAGGTATTCCTACTGATA 2380
Query 17631 TTAATAAGAAGACTAAAAAACCTACAATTGAAGTACTTTTTACTTATATGCATGCAGGTG 17690
| || |||||||| | | ||| | ||| |||||||| | ||||| ||||
Sbjct 2381 TACATCCAAAGACTAATATTTCAACAGTAGAAACGGTTTTTACTACATTACATGCTGGTG 2440
Query 17691 GAAAATTTAATAAGGATAGCTTTAAAGTATCAGGCGGTAAGAATGGTATTGGTTTAAAAG 17750
|||||||| |||| | | | |||||||||||| ||| | ||||| ||||| ||
Sbjct 2441 GAAAATTTGATAATGGTTCTTATAAAGTATCAGGTGGTTTGCATGGTGTTGGTGCTTCAG 2500
Query 17751 CAGTTAATGCT 17761
||| ||||||
Sbjct 2501 TAGTAAATGCT 2511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 803191349920080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |