Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq743 100 4e-16 >seq743 Length=263205 Score = 100 bits (110), Expect = 4e-16 Identities = 176/254 (69%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 99519 AAAGGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAAT 99578 || |||||||| || ||||| |||||| |||| |||| || ||||| ||||| || || Sbjct 73489 AAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAAC 73430 Query 99579 TTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGC-GCTGTCACCTCCGTTCTATTATTCA 99637 | || | |||||||| || || || || |||| | || | ||| | || Sbjct 73429 CTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGT-TCAAGGCGATTGTCCA 73371 Query 99638 TGAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGT 99697 ||||| || ||||| || || || ||||| | || ||| | |||| || || Sbjct 73370 CGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGT 73311 Query 99698 CACTATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCA 99757 ||| |||||| | ||||||| ||| ||||| || | || ||||| ||||| ||||| Sbjct 73310 CACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCA 73251 Query 99758 GTGGCGGTCTTGGC 99771 |||||| || |||| Sbjct 73250 GTGGCGCTCATGGC 73237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734261441518440