Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq812 93.3 2e-14 >seq812 Length=1388629 Score = 93.3 bits (102), Expect = 2e-14 Identities = 170/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 31022 GCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGAACAGTGCGTCCGCGATC 31081 ||||| || ||||| | ||||| || | || |||| ||| | | ||| |||||| Sbjct 74511 GCCTTGATAACCACCGCCACGCCTTTTGGTTTCAGGATGTCGTTGATGGTGTCGGCGATC 74570 Query 31082 TGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGC--ATACATGTCCGCCAGGCGGG 31139 || | || ||| |||||| |||||||| || || || |||||| | ||| || | Sbjct 74571 TGCGCCGTCAGCTTTTCCTGGACTTGCAGCCGCCGCGCGAATACAT--CGACCACCCGCG 74628 Query 31140 ACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTGACCGTGCCGA 31199 ||||||||| | ||| || | || |||||||| | |||| || | | || |||| Sbjct 74629 CCAGCTTGCTGATGCCGACCACGCGCCCGTTCGGCACATAGCCGACCCAGGCCTGCCCGA 74688 Query 31200 AGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCA 31259 | |||||| | ||||||||||||||| | || | | ||| |||||| | | || Sbjct 74689 TCACCGGCGCCATGTGATGCTCGCAATGGCTCTCGAAGCGAATGCCGCGCAGCAGGATCA 74748 Query 31260 TCTGGTC 31266 ||| ||| Sbjct 74749 TCTCGTC 74755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187286266128064