Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031074.1
Length=92580
Score E
Sequences producing significant alignments: (Bits) Value
seq743 181 6e-41
seq1482 174 9e-39
seq890 163 2e-35
>seq743
Length=263205
Score = 181 bits (200), Expect = 6e-41
Identities = 507/761 (67%), Gaps = 29/761 (4%)
Strand=Plus/Minus
Query 829 GAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGA 888
||||| || ||||||||||| || |||||| |||||| ||| |||| | | |
Sbjct 73490 GAAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAA 73431
Query 889 CCTCACCGAGGGCTTCCCGCTG--GTC-ACCACGAAGCGCGTCCACTTCAAATCGGTTGC 945
|||| ||| || || ||| || | | |||| |||| | | ||||| || |||
Sbjct 73430 CCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGC---TGCCGTTCAAGGCGATTGT 73374
Query 946 GTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGG 1005
||||||| |||||||| ||| |||||||| |||||| || | | || ||
Sbjct 73373 CCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGG 73314
Query 1006 CGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGC 1065
||||||||||||||||||||||| |||||| ||| | || ||||| |||||||||
Sbjct 73313 TGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAA 73254
Query 1066 GCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCG-TGGATTGACCAGATCTCGG 1124
||||||||| || |||| | ||| || |||| | || | || ||||||||| ||
Sbjct 73253 GCAGTGGCG---CT--CATGGC-AGG-CGCCGGATGGCCGCAGCATCGACCAGATCGCGA 73201
Query 1125 CCGCCGTGGAGCTGCTTCGCGAGGAC-CCTGACTCGCGCCGGAACGTGGTATCCGCATGG 1183
| | | || | ||| | || || || ||||| ||| | || |||||||
Sbjct 73200 ACCTCATCCGCATGATCCGC-ACCACGCCGGATTCGCGGCGGCTGATCGTCAGCGCATGG 73142
Query 1184 AACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTAC 1243
|| | || || ||||||| || | || ||||| | |||||||| | |||
Sbjct 73141 AATCCGGCCGATGTCGATCACATGGCGCTGCCGCCATGCCATTGCCTGTTCCAGTTCTAC 73082
Query 1244 GTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGT 1303
|||| ||||| |||||| ||| |||| ||||| || ||| |||| |||||
Sbjct 73081 GTCGCGAACGGCAAACTCTCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGC 73022
Query 1304 GTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGC 1363
||||||||||| ||||| || || ||||| || || ||| |||| ||| | | |
Sbjct 73021 GTGCCGTTCAACATCGCGTCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGAT 72962
Query 1364 CTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTC 1423
|| | ||| || | ||| || ||||||| || | || |||||| |
Sbjct 72961 CTTGCGCCGGGCGATTTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTG 72902
Query 1424 GACCAGGCGCTGATGCAGCTCCGCCGACGACCGCG-GCCCTACCCGAGGCTCGTGCTACA 1482
|| ||||||| |||| || || || ||||| || || || ||| ||||| |||
Sbjct 72901 GAGCAGGCGCGCCTGCAACTGACGCGGCGGCCGCGCGCGCTGCC---GGC-CGTGC-ACA 72847
Query 1483 CCA--CGCGCCGT-----CGATCTTCGACTACCGGTACGAGCACATCCACCTCGTGAACT 1535
|| | || || ||||||| | ||| |||||| || || | |||| |||||
Sbjct 72846 TCAATCCGGCGGTGAAGGATATCTTCGGGTTCCGTTACGAGGACTTCAAACTCGAGAACT 72787
Query 1536 ACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576
|||| ||||| ||| |||||||| ||| || || |||
Sbjct 72786 ACGATCCGCATCCGCACATCAAGGCCGAGGTCGCGGTGTGA 72746
>seq1482
Length=483770
Score = 174 bits (192), Expect = 9e-39
Identities = 354/526 (67%), Gaps = 6/526 (1%)
Strand=Plus/Plus
Query 829 GAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGA 888
|||| | || |||||||||||||| |||||| ||||||| ||| ||| || |
Sbjct 421428 GAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAA 421487
Query 889 CCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTA 948
| ||| || ||||||||| |||| |||||| | | |||||||| | | |
Sbjct 421488 TTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCGTCCA 421547
Query 949 CGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGT 1008
|| || || ||||| || | |||||||| ||| | ||| ||||| ||| |||||||
Sbjct 421548 TGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGCGT 421607
Query 1009 CACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCA 1068
| | |||||||| |||||||| |||| ||| | |||||||| ||||| || ||||
Sbjct 421608 CTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTTCGCA 421667
Query 1069 GTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGC 1128
|||||| |||| | |||||| | | || || |||||| | ||
Sbjct 421668 GTGGCGTTCATGGCCCGCGCCGGACGGCCG------CAGCATCGATCAGATCGCCAACGT 421721
Query 1129 CGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGT 1188
||| ||| || | || | || || ||||| ||| | || || || |||||
Sbjct 421722 CGTCGAGATGATCCGGCGCAATCCGGATTCGCGGCGGCTGATCGTCTCGGCGTGGAATCC 421781
Query 1189 CGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGT 1248
|| || || | ||||| || | ||||||||| | |||| ||| | || ||||
Sbjct 421782 CGCCGAGGTCGATAAGATGGCGCTGCCCCCGTGCCATTGCCTGTTTCAGTTCTATGTCGC 421841
Query 1249 CGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCC 1308
| ||||| || ||| ||| |||| |||||| ||| || | |||||||| |||||
Sbjct 421842 CAACGGCAAACTGTCGTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCC 421901
Query 1309 GTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAG 1354
|||||| ||||| || || ||||| || || ||| |||| |||
Sbjct 421902 GTTCAACATCGCATCCTATGCGCTGCTGACGATGATGGTCGCACAG 421947
>seq890
Length=125401
Score = 163 bits (180), Expect = 2e-35
Identities = 378/558 (68%), Gaps = 40/558 (7%)
Strand=Plus/Minus
Query 795 ACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAG-GATGATCGCACCGGCACCGGC 853
||||| ||||||||||||| || | |||| | || | || || |||||||||||||||
Sbjct 47762 ACCTGCTGCGCGACATCCTCGACAATGGCGTG-CGCCGCGACGACCGCACCGGCACCGGC 47704
Query 854 ACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCG---CTG 910
|| ||| || ||||| |||| | || | || || || |||||||||| |||
Sbjct 47703 ACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCCAAGGGCTTCCCCGTCCTG 47644
Query 911 GTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGT 970
||||| ||||| | ||| | ||| | |||||| ||||||||||| |
Sbjct 47643 ACCACCAAGAAGC---TGCACCTGCGTTCGATCATCATCGAACTGCTGTGGTTCCTGCGC 47587
Query 971 GGCGACACGAACGTGAAGGC--GCTCAACGACAACGGCGTCACCATCTGGGACGAGTGGG 1028
||||| || ||| | ||| |||||| || ||||||||| ||||||||| || ||||
Sbjct 47586 GGCGAGACCAACAT--CGGCTGGCTCAAGGAGAACGGCGTCCGCATCTGGGATGAATGGG 47529
Query 1029 CCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCG 1088
| ||||||| || | || || || ||||| ||| |||||||| || | | | | ||
Sbjct 47528 CAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGC-GCTCGTGGACGGCG 47470
Query 1089 -AGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGAGCTGCTTCGCG-- 1145
|||||| | | || || ||||| || || | | ||| ||| ||
Sbjct 47469 CCGGACGGCCG--CCTC----ATCGACCAAAT---------CGAGAAACTGGTTCACGGG 47425
Query 1146 ---AGGAC----CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTC 1198
| ||| || || || || || | || ||| |||||| | ||| |
Sbjct 47424 CTCAAGACCAATCCGAACGGTCGTCGCCACATCGTCAGCGCCTGGAACCCGGCGGACGTG 47365
Query 1199 AGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGG 1258
||||||||| || | ||||||||| | |||||||| | | ||||| |||||
Sbjct 47364 GACGACATGGCCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCTTCGTCGCAGACGGAAAA 47305
Query 1259 CTCTCGCTG-CAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATAT 1317
||| |||| ||| | || ||||| ||||| ||||| ||||| || ||||||||||| ||
Sbjct 47304 CTC-AGCTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 47246
Query 1318 CGCCTCGTACGCGCTCCT 1335
|||||| ||||| || ||
Sbjct 47245 CGCCTCCTACGCCCTGCT 47228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 296125789960599
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |