Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq1155 93.3 4e-14 seq763 84.2 2e-11 >seq1155 Length=1012 Score = 93.3 bits (102), Expect = 4e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 95710 CACCA-CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 95768 ||||| |||| ||| | |||| |||| |||||||| ||||||||||| ||| |||||||| Sbjct 433 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 492 Query 95769 TTCGAATCCTGTCACCCCGAC 95789 ||||||||||||| |||||| Sbjct 493 TTCGAATCCTGTCTTCCCGAC 513 >seq763 Length=251843 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 120472 GGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGATCGA 120531 |||||| ||||| |||| |||| ||| ||| || ||||||||||||| ||||| Sbjct 12328 GGGCCGGGGATCGGCCGCCAACTCGGCCGTCTGCTATGTGCTGGGCATCACCTCCATCGA 12269 Query 120532 TCC-GATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGACTTTC 120590 || || | ||||||| |||||||||||||| || | ||| |||| ||| | Sbjct 12268 CCCTGAACGCA-ACGACCTCCTGTTCGAGCGCTTCGTCTCCGAGGAGCGCCGCGAACCGC 12210 Query 120591 CCGACATCGACGTCGACTTCCAG 120613 |||||||||||||||| ||| || Sbjct 12209 CCGACATCGACGTCGATTTCGAG 12187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515014349737800