Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq890 183 5e-41
seq1482 150 3e-31
seq743 134 2e-26
>seq890
Length=125401
Score = 183 bits (202), Expect = 5e-41
Identities = 184/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130
||||| |||||||| |||||| | | ||||| ||||| || ||||| ||| |
Sbjct 47721 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCC 47662
Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190
|| || ||||| | | |||||||| ||| |||||||||| || |||||| |||||||
Sbjct 47661 AAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACTG 47602
Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250
||||||||||| |||||| ||||||||| | || || || ||| |||| | |||
Sbjct 47601 CTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCATC 47542
Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309
|||||||| |||||||| | || ||||| |||||||||||||| || |||||||||||
Sbjct 47541 TGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGCG 47483
Score = 111 bits (122), Expect = 2e-19
Identities = 128/170 (75%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 196754 CTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATCGCTTC 196813
||| ||||| || ||||| || || ||| ||||||| || || |||||||||||||| ||
Sbjct 47299 CTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTC 47240
Query 196814 GTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGATTTCGT 196873
||||| ||| || | |||||||| ||| || | ||| | |||| || |||||
Sbjct 47239 CTACGCCCTGCTGACCCTGATGGTGGCCCAGGTCGTGGGTCTGGAGCCGGGCGAGTTCGT 47180
Query 196874 CTGGACGGGCGGCGATACCCATCTGTACTCT-AACCATCTGGAACAGGCC 196922
| || |||||| |||| ||||| ||| ||||||||||||||||||
Sbjct 47179 CCATACCTTCGGCGACGCCCACCTGTA-TCTGAACCATCTGGAACAGGCC 47131
>seq1482
Length=483770
Score = 150 bits (166), Expect = 3e-31
Identities = 181/246 (74%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130
||||| |||||||| || || | || | ||||| |||||| ||| | || |
Sbjct 421435 GACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAATTTGGCC 421494
Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190
||| ||||||||| |||| || || ||| | ||| ||| ||| |||| || |||
Sbjct 421495 GCAGGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCGTCCATGAGCTG 421554
Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250
| ||||| ||||| ||||||||||||||| |||| || || ||| || |||| |||
Sbjct 421555 CTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAAGGACCACGGCGTCTCGATC 421614
Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGT 196310
|||||||||||||| || || | |||||||| || || ||||| ||| ||||||||||
Sbjct 421615 TGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGTCTATGGTTCGCAGTGGCGT 421674
Query 196311 GCATGG 196316
|||||
Sbjct 421675 TCATGG 421680
>seq743
Length=263205
Score = 134 bits (148), Expect = 2e-26
Identities = 196/272 (72%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 196047 TTGAACGAAGGT-CACGAGAAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGG 196105
|||| ||| || ||| |||| | ||||| ||||||||||| || | || | |||||
Sbjct 73507 TTGAGCGACGGCGCAC-AGAAGGGCGACCGCACCGGCACGGGTACGCTGTCGGTGTTCGG 73449
Query 196106 GTATCAGATGCGTTTTGACCTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCA 196165
|||||||||| || |||| | || || ||| || || ||||||||| |||
Sbjct 73448 TCATCAGATGCGCTTCAACCTCGCCGCCGGTTTTCCGATGACGACGACCAAAAAGCTGC- 73390
Query 196166 CCTGCGAT-CTATCATCCACGAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGT 196224
| | | | | || ||||||||||| ||||||| || ||||||||||||| | | |
Sbjct 73389 CGTTCAAGGCGATTGTCCACGAACTGCTGTGGTTTCTCGCCGGCGACACCAACGTGCGCT 73330
Query 196225 ATCTGAAAGACAACAACGTCAGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTG 196284
||||| | | || |||| |||||||| |||||||| || | | || |||||||
Sbjct 73329 ATCTGCAGAATAATGGTGTCACCATCTGGGACGAGTGGGCGGACGCCAACGGGGATCTTG 73270
Query 196285 GCCCCGTCTACGGTAAGCAGTGGCGTGCATGG 196316
| || |||||||| ||||||||||| |||||
Sbjct 73269 GTCCGGTCTACGGCAAGCAGTGGCGCTCATGG 73238
Score = 89.7 bits (98), Expect = 8e-13
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 196748 ACTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACAT 196807
||| || || ||||| || ||||| || ||||| || ||||| || |||||||||||
Sbjct 73067 ACTCTCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACAT 73008
Query 196808 CGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGA 196867
||| || || || ||| || ||| | |||||| | || | | | |||| ||
Sbjct 73007 CGCGTCCTATGCGCTGCTGACGATGATGATCGCACAGGTGACGGATCTTGCGCCGGGCGA 72948
Query 196868 TTTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGC 196921
|||| || ||| |||||| | |||||||| || ||||||||||| |||||
Sbjct 72947 TTTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGC 72894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770292766368840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |