Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq890 132 2e-26 >seq890 Length=125401 Score = 132 bits (146), Expect = 2e-26 Identities = 295/439 (67%), Gaps = 4/439 (1%) Strand=Plus/Minus Query 51807 AAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTG 51866 ||||||||||| || | |||||||||||| |||| | | || | || || || Sbjct 47661 AAGGGCTTCCCCGTCCTGACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACTG 47602 Query 51867 CTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATT 51926 |||||||| || ||| || ||| || | ||| | || |||||||| |||| Sbjct 47601 CTGTGGTTCCTGCGCGGCGAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCATC 47542 Query 51927 TGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCG- 51985 ||||| |||||||| || | | || | || || || || ||||| ||||||||||| Sbjct 47541 TGGGATGAATGGGCAGACGCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGCGC 47482 Query 51986 TAGTTGGGATGCTGGTGG-CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAATCAA 52044 | || ||| | | || |||| ||||||| || ||| | || | || | Sbjct 47481 TCGT--GGACGGCGCCGGACGGCCGCCTCATCGACCAAATCGAGAAACTGGTTCACGGGC 47424 Query 52045 TTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGG 52104 | |||| | |||| | |||| || ||||| ||| || ||||| || || ||| Sbjct 47423 TCAAGACCAATCCGAACGGTCGTCGCCACATCGTCAGCGCCTGGAACCCGGCGGACGTGG 47364 Query 52105 ATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGC 52164 | || ||||| || | || ||||| || ||||| |||| || || || || || | Sbjct 47363 ACGACATGGCCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCTTCGTCGCAGACGGAAAAC 47304 Query 52165 TTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTG 52224 | ||||| |||||||||| |||||||| ||| ||||||| ||||| ||||| | Sbjct 47303 TCAGCTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 47244 Query 52225 CCAGCTATTCCTTGCTGAC 52243 || ||| || ||||||| Sbjct 47243 CCTCCTACGCCCTGCTGAC 47225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190092616172390