Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq1095 86.0 8e-12 >seq1095 Length=1089284 Score = 86.0 bits (94), Expect = 8e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 19832 GTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAAGTAATTCGTGGAGGTTCA 19891 ||||||||||||||||||||||||| ||||||||||||||| | || | |||| ||||| Sbjct 879705 GTGGCGGAATTGGTAGACGCGCTGGATTTAGGTTCCAGTGACGAAAGTTGTGGGGGTTCG 879646 Query 19892 AGTCC 19896 ||||| Sbjct 879645 AGTCC 879641 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 19832 GTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAAGTAATTCGTGGAGGTTCA 19891 |||||||||||||||||||||||| || |||| |||||| | || |||||||||||| Sbjct 1026292 GTGGCGGAATTGGTAGACGCGCTGCCTTGAGGTGGCAGTGATGCAAGTCGTGGAGGTTCG 1026233 Query 19892 AGTCCTCTC-AGCG 19904 ||||||||| |||| Sbjct 1026232 AGTCCTCTCGAGCG 1026219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622058743955880