Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031245.1 Length=221908 Score E Sequences producing significant alignments: (Bits) Value seq1443 84.2 3e-11 >seq1443 Length=14236 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 129965 CTGCTGAGTTAATCAAGCATGCATCTAATGCATTCCTAGCTACTAAAATATCATTTATGA 130024 ||||||| | || || |||| |||||||| || ||||| || || | | ||||| | Sbjct 1410 CTGCTGAAATGATTAAATATGCTTCTAATGCTTTTCTAGCAACAAAGGTTGCTTTTATCA 1469 Query 130025 ATGGTATTGCTAAGCTATGTGAATTCTACGGAGGTAATGTTGACGAGGTAGCTCGTGGGA 130084 ||| || || ||||||| | | |||| | ||||| ||||| | | Sbjct 1470 ATGAGATGGCAGGTTTATGTGAGCTATTAGGAGCAGACATTGACCTTTTAGCTAACAGTA 1529 Query 130085 TGGGAATGGATAGTCGAATCGGTAATCAATTCTTAAAAGCTGGATTAGGATTCGGAGGTT 130144 |||||||||| | |||| ||||| |||| | |||||||| |||||| ||||| | Sbjct 1530 TGGGAATGGACCATAGAATAGGTAAGGAATTTCTCAAAGCTGGTCCAGGATTTGGAGGAT 1589 Query 130145 CATGTTTCCCTAAGGATGTAT 130165 ||||||| ||||| ||| ||| Sbjct 1590 CATGTTTTCCTAAAGATTTAT 1610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709964296794720