Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_031261.1 Length=48670 Score E Sequences producing significant alignments: (Bits) Value seq743 122 3e-23 >seq743 Length=263205 Score = 122 bits (134), Expect = 3e-23 Identities = 305/457 (67%), Gaps = 30/457 (7%) Strand=Plus/Minus Query 38729 TGCGCGTGTTGAAACCGGGCGGTCACATGTTGGCGTTCGGCGGTTCGCGCACGTGGCACC 38788 |||||||| ||||||| ||||| ||| | |||||||||| |||||| | |||| Sbjct 30928 TGCGCGTGCTGAAACCTGGCGGGCACGTCGCTGCGTTCGGCGCATCGCGCGGCTATCACC 30869 Query 38789 GGCTGGCGGCGGCGATCGAGGACGCCGGGTTCGAGGTCCGCGACTCGATCGCGTGGCTGT 38848 | ||||| |||||||| || || ||||| || ||||||||||| || |||| | | Sbjct 30868 GCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGATTT 30809 Query 38849 ACGGCAGCGGGTTCCCCAAGTCGCTCGACGTATCCAAGGCGATCGACAAGGCCGCAGGCG 38908 | || | ||||| || ||||||| || || ||||| ||| || || || || || | Sbjct 30808 ATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGCGGCGGGTG 30749 Query 38909 CCGAGCGCGAGCAGGTACCAGCGACGGGCGGACTCCACAACAACGCGAACCTTAACGACG 38968 | || || ||| | | | |||| | || ||| |||| |||| |||| || Sbjct 30748 CGGAACGTGAGGTGCTGC--GCGAACG-----CTACACCACAAAGCGA--TTTAAGCCCG 30698 Query 38969 ATGGC-------TGGTCCAAGAT-CG--------GCAGCAGTACACCAATGATG-GATGG 39011 || | || | ||| | || ||| | | || || | ||| Sbjct 30697 GTGCCACCGTCGAGGCCGAAGGTGCGTGGGGTAAGCAAGATGTCGCCTATACCGCCGTGG 30638 Query 39012 CCCCAGC-CCCGCTACCCCCGAGGCCGCGCAGTGGCAGGGCTGGGGCACGGCGCTCAAAC 39070 | || || || || ||||| ||||| || ||| | || ||||| || |||||||||| Sbjct 30637 ATACTGCACCTGCAACGCCCGAAGCCGCCCAATGGGAAGGATGGGGAACCGCGCTCAAAC 30578 Query 39071 CGGCGTTTGAGCCAATCGTCGTCGCGCGGAAACC-CTTGCAG--GGCACCGTCGCCGCGA 39127 | || || || || || ||| ||||||| || || || ||| ||||| || ||||| | Sbjct 30577 CCGCCTTCGAACCCATTGTCCTCGCGCGCAAGCCGCTGTCAGAAGGCACGGTTGCCGCCA 30518 Query 39128 ACGTGCTCGACCACGGCACCGGCGCGCTGAACATCGA 39164 ||||||| | ||||| ||||||||||| || || Sbjct 30517 ACGTGCTGCGCTGGGGCACGGGCGCGCTGAATATTGA 30481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155619629824016